Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 5.0e-97 357.8 189 100.0
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 7.8e-74 280.8 192 80.2
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 3.3e-72 275.4 196 79.6
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.6e-71 273.1 196 78.6
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.4e-62 243.4 191 72.3
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 1.4e-62 243.4 193 69.9
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 1.8e-62 243.0 170 77.6
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 3.1e-62 242.3 187 74.3
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 3.1e-62 242.3 180 75.0
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 4.0e-62 241.9 199 70.4
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 4.0e-62 241.9 197 68.5
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 4.0e-62 241.9 192 71.4
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 5.2e-62 241.5 159 81.8
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 6.8e-62 241.1 192 71.4
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 6.8e-62 241.1 161 78.9
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 6.8e-62 241.1 170 77.1
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 6.8e-62 241.1 176 75.0
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.5e-61 240.0 189 71.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.5e-61 240.0 189 71.4
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.5e-61 240.0 156 82.1
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.5e-61 240.0 193 69.9
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.5e-61 240.0 161 79.5
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 2.0e-61 239.6 164 77.4
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 4.4e-61 238.4 170 76.5
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 7.5e-61 237.7 193 70.5
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 9.8e-61 237.3 159 79.9
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 9.8e-61 237.3 166 77.7
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 9.8e-61 237.3 190 70.0
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 1.3e-60 236.9 193 71.5
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.3e-60 236.9 197 69.0
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 1.7e-60 236.5 170 75.9
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 1.7e-60 236.5 191 70.7
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 2.2e-60 236.1 180 71.1
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.9e-60 235.7 155 81.3
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 3.7e-60 235.3 182 74.2
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 4.9e-60 235.0 164 78.0
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 4.9e-60 235.0 182 70.9
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 8.3e-60 234.2 160 80.6
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 8.3e-60 234.2 160 80.6
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.4e-59 232.6 159 79.2
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.4e-59 232.6 159 79.2
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.4e-59 232.6 159 79.2
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 2.4e-59 232.6 160 79.4
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.2e-59 232.3 197 68.5
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 3.2e-59 232.3 181 70.2
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 4.1e-59 231.9 193 69.9
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 4.1e-59 231.9 158 80.4
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 4.1e-59 231.9 170 74.7
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.4e-59 231.5 160 79.4
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 7.0e-59 231.1 157 78.3
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 9.2e-59 230.7 176 71.6
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 9.2e-59 230.7 158 80.4
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 9.2e-59 230.7 160 79.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.2e-58 230.3 149 84.6
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 1.2e-58 230.3 158 78.5
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 2.1e-58 229.6 203 69.5
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 2.7e-58 229.2 197 67.0
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 3.5e-58 228.8 197 67.0
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 6.0e-58 228.0 148 83.8
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 1.0e-57 227.3 165 75.8
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.0e-57 227.3 191 70.2
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.0e-57 227.3 153 77.1
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.7e-57 226.5 194 69.1
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 2.3e-57 226.1 165 75.2
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 3.0e-57 225.7 182 69.2
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 3.9e-57 225.3 172 70.9
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 5.1e-57 224.9 187 69.5
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 6.6e-57 224.6 189 68.8
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 8.6e-57 224.2 157 78.3
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 8.6e-57 224.2 158 75.9
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.1e-56 223.8 179 69.3
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 1.1e-56 223.8 163 74.8
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 1.1e-56 223.8 163 74.8
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.1e-56 223.8 192 68.2
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.9e-56 223.0 169 75.1
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.9e-56 223.0 190 67.4
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 1.9e-56 223.0 187 69.0
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 4.3e-56 221.9 181 68.5
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 4.3e-56 221.9 197 66.5
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 5.6e-56 221.5 154 76.6
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 7.3e-56 221.1 153 79.1
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 1.2e-55 220.3 193 65.3
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.6e-55 219.9 156 75.6
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.6e-55 219.9 156 75.6
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.6e-55 219.9 152 78.9
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 2.1e-55 219.5 164 72.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 2.1e-55 219.5 189 67.2
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.1e-55 219.5 166 72.9
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 2.8e-55 219.2 194 64.9
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 2.8e-55 219.2 172 70.9
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 6.2e-55 218.0 166 74.7
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 8.1e-55 217.6 155 74.8
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.1e-54 217.2 166 74.1
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.4e-54 216.9 165 72.7
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 1.4e-54 216.9 134 85.1
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 1.2e-53 213.8 159 75.5
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.5e-53 213.4 151 77.5
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 2.6e-53 212.6 158 73.4
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 6.4e-52 208.0 203 62.6
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 4.1e-51 205.3 164 69.5
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.3e-49 199.5 196 63.3
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 8.6e-49 197.6 141 72.3
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 1.5e-48 196.8 163 70.6
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 3.3e-48 195.7 181 62.4
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 5.6e-48 194.9 148 67.6
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 9.5e-48 194.1 117 87.2
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 1.6e-47 193.4 120 85.0
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 4.7e-47 191.8 126 77.8
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 2.4e-46 189.5 119 89.9
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.5e-45 186.8 115 82.6
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 2.4e-43 179.5 130 74.6
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 7.1e-43 177.9 131 68.7
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.9e-40 169.9 109 82.6
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 7.3e-40 167.9 170 55.3
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.6e-37 159.5 133 61.7
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 4.2e-35 152.1 137 61.3
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 1.0e-33 147.5 132 57.6
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.1e-32 144.1 87 88.5
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.5e-32 142.9 87 88.5
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.3e-32 142.1 87 87.4
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 4.8e-31 138.7 152 56.6
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 4.0e-30 135.6 153 54.2
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 5.8e-29 131.7 86 80.2
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 3.2e-27 125.9 126 61.9
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 3.0e-25 119.4 92 71.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 6.7e-25 118.2 78 79.5
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 1.3e-20 104.0 99 61.6
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.6e-18 95.5 54 81.5
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 3.3e-08 62.8 105 37.1
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 4.1e-06 55.8 128 31.2
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 9.0e-06 54.7 116 31.9


User provided reference genes

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