Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.9e-170 602.4 304 100.0
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.8e-147 525.0 304 89.1
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.2e-121 440.3 275 83.3
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.5e-111 406.8 297 70.7
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 6.3e-110 401.4 303 69.6
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.8e-109 399.8 292 71.2
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 5.4e-109 398.3 290 72.4
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 1.2e-108 397.1 301 69.8
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.6e-108 396.7 297 69.0
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 4.5e-108 395.2 297 71.7
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 2.9e-107 392.5 264 74.6
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.9e-106 389.8 291 70.8
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.9e-106 389.8 295 67.8
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 2.5e-106 389.4 297 70.0
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 4.2e-106 388.7 297 67.3
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 9.5e-106 387.5 287 70.7
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 2.1e-105 386.3 291 70.1
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 2.8e-105 386.0 291 68.4
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 2.8e-105 386.0 241 79.7
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 4.7e-105 385.2 270 74.1
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 8.0e-105 384.4 288 68.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 8.0e-105 384.4 305 66.6
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 1.0e-104 384.0 242 77.7
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.4e-104 383.6 290 69.3
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.4e-104 383.6 241 78.8
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 2.3e-104 382.9 297 69.7
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 2.3e-104 382.9 260 74.6
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 3.0e-104 382.5 247 81.4
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 5.2e-104 381.7 293 68.9
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 5.2e-104 381.7 297 68.0
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 6.8e-104 381.3 258 72.5
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 8.9e-104 380.9 290 67.9
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.5e-103 380.2 300 67.0
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.4e-103 379.0 305 65.9
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 4.4e-103 378.6 292 68.2
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 4.4e-103 378.6 288 67.0
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 4.4e-103 378.6 265 70.6
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 7.5e-103 377.9 288 69.8
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 7.5e-103 377.9 289 68.2
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 9.8e-103 377.5 289 67.8
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.7e-102 376.7 290 69.3
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.2e-102 376.3 288 67.4
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 2.2e-102 376.3 300 67.7
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 2.8e-102 375.9 270 70.4
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 2.8e-102 375.9 285 69.5
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.1e-101 374.0 256 74.2
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 1.4e-101 373.6 283 68.9
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 2.4e-101 372.9 243 74.5
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 7.0e-101 371.3 301 65.8
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 7.0e-101 371.3 264 73.1
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.6e-100 370.2 307 63.5
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 4.5e-100 368.6 253 72.3
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 4.5e-100 368.6 298 66.4
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.9e-100 368.2 294 67.3
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 5.9e-100 368.2 258 72.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 7.8e-100 367.9 293 67.2
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.0e-99 367.5 240 77.1
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-99 367.1 294 67.3
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.3e-99 367.1 258 72.1
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 1.7e-99 366.7 292 66.8
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.7e-99 366.7 291 67.7
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 6.6e-99 364.8 253 70.4
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 6.6e-99 364.8 296 66.2
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.9e-98 363.2 294 66.3
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.9e-98 363.2 294 66.3
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.5e-98 362.8 296 65.2
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 4.3e-98 362.1 271 69.7
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 5.6e-98 361.7 247 73.7
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.8e-97 359.4 312 62.8
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 4.7e-97 358.6 265 68.7
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.0e-96 357.5 305 63.6
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.0e-96 357.5 305 63.6
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 8.9e-96 354.4 307 63.2
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 3.4e-95 352.4 256 69.1
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.7e-94 350.1 285 64.6
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 2.2e-94 349.7 287 63.4
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 4.9e-94 348.6 255 71.0
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.9e-93 346.7 267 68.9
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 2.4e-93 346.3 273 67.4
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 3.2e-93 345.9 273 67.4
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.0e-91 340.9 278 61.2
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.9e-90 336.7 233 73.0
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 3.1e-88 329.3 225 76.4
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 5.2e-88 328.6 260 66.5
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 8.9e-88 327.8 223 73.1
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 2.2e-86 323.2 291 62.5
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 4.1e-85 318.9 240 65.8
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 5.6e-82 308.5 234 65.4
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 5.6e-82 308.5 233 65.2
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 4.4e-79 298.9 204 75.0
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 4.4e-79 298.9 221 68.3
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 4.9e-78 295.4 246 60.2
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 7.1e-77 291.6 249 62.7
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.7e-75 287.0 243 63.4
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 3.6e-73 279.3 187 73.3
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 4.2e-69 265.8 297 53.5
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.4e-61 240.0 236 54.2
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 6.6e-59 231.9 228 51.8
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.8e-57 225.7 308 46.4
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.9e-53 213.8 242 45.0
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 8.4e-46 188.3 142 63.4
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 9.3e-45 184.9 239 50.6
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 7.4e-42 175.3 253 43.9
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.4e-40 171.0 235 39.6
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 6.9e-40 168.7 258 36.0
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.1e-34 151.4 243 36.2
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 4.5e-31 139.4 89 74.2
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 6.5e-22 109.0 84 61.9
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 3.0e-19 100.1 108 49.1
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.6e-15 87.8 101 49.5
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 1.2e-12 78.2 58 62.1
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.6e-12 77.8 44 77.3
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.7e-12 76.3 103 48.5
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 3.7e-09 66.6 67 53.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 3.7e-09 66.6 67 53.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 1.1e-08 65.1 67 52.2
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 4.5e-07 59.7 53 50.9
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-06 57.8 49 61.2


User provided reference genes

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