Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028124 Sechium edule HOM05D005244 ORTHO05D006539 1.2e-286 989.2 494 100.0
Sed0018574 Sechium edule HOM05D005244 ORTHO05D006539 4.3e-265 917.5 467 97.2
Sed0013671 Sechium edule HOM05D005244 ORTHO05D006539 4.9e-237 824.3 469 90.6
ClCG03G011630 Citrullus lanatus HOM05D005244 ORTHO05D006539 7.9e-235 817.0 469 87.0
CsaV3_1G044170 Cucumis sativus L. HOM05D005244 ORTHO05D006539 5.6e-233 810.8 468 86.1
MELO3C010012.2 Cucumis melo HOM05D005244 ORTHO05D006539 1.5e-230 802.7 468 86.1
Prupe.1G001000 Prunus persica HOM05D005244 ORTHO05D006539 9.1e-191 670.6 444 73.9
Dinv12631 Davidia involucrata HOM05D005244 ORTHO05D006539 3.8e-189 665.2 441 74.1
MD04G1001000 Malus domestica HOM05D005244 ORTHO05D006539 5.5e-188 661.4 444 73.0
CiPaw.07G237900 Carya illinoinensis HOM05D005244 ORTHO05D006539 9.4e-188 660.6 438 74.2
Manes.02G225500 Manihot esculenta HOM05D005244 ORTHO05D006539 2.1e-187 659.4 453 74.2
MSTRG.26510 Avicennia marina HOM05D005244 ORTHO05D006539 2.3e-186 656.0 440 72.3
TWI34G0889 Tripterygium wilfordii HOM05D005244 ORTHO05D006539 2.0e-185 652.9 448 72.1
QL11p005809 Quercus lobata HOM05D005244 ORTHO05D006539 2.6e-185 652.5 469 69.7
Atru.chr7.1024 Acer truncatum HOM05D005244 ORTHO05D006539 9.7e-185 650.6 407 77.1
QL11p006533 Quercus lobata HOM05D005244 ORTHO05D006539 2.2e-184 649.4 469 69.3
CSS0037198 Camellia sinensis var. sinensis HOM05D005244 ORTHO05D006539 6.3e-184 647.9 455 73.2
Actinidia02527 Actinidia chinensis HOM05D005244 ORTHO05D006539 8.2e-184 647.5 442 73.5
COL.COLO4_08830 Corchorus olitorius HOM05D005244 ORTHO05D006539 8.2e-184 647.5 443 71.8
Actinidia07539 Actinidia chinensis HOM05D005244 ORTHO05D006539 4.1e-183 645.2 442 72.2
Nitab4.5_0000807g0220 Nicotiana tabacum HOM05D005244 ORTHO05D006539 7.0e-183 644.4 442 70.8
TAR383G0812 Trochodendron aralioides HOM05D005244 ORTHO05D006539 4.5e-182 641.7 441 73.0
Thecc.09G197300 Theobroma cacao HOM05D005244 ORTHO05D006539 5.9e-182 641.3 444 71.6
Nitab4.5_0000170g0280 Nicotiana tabacum HOM05D005244 ORTHO05D006539 8.5e-181 637.5 442 70.4
Nn8g41249 Nelumbo nucifera HOM05D005244 ORTHO05D006539 1.5e-180 636.7 444 71.2
Sopen07g022510 Solanum pennellii HOM05D005244 ORTHO05D006539 4.7e-179 631.7 441 69.8
CAN.G57.4 Capsicum annuum HOM05D005244 ORTHO05D006539 6.1e-179 631.3 445 69.2
Potri.006G080700 Populus trichocarpa HOM05D005244 ORTHO05D006539 5.2e-178 628.2 458 69.4
SalBow5G4830 Salvia bowleyana HOM05D005244 ORTHO05D006539 4.8e-176 621.7 445 68.8
Lju50C34G1 Lonicera japonica HOM05D005244 ORTHO05D006539 2.4e-175 619.4 525 61.1
PGR044G0827 Punica granatum HOM05D005244 ORTHO05D006539 7.0e-175 617.8 454 68.7
Eucgr.C02153 Eucalyptus grandis HOM05D005244 ORTHO05D006539 5.9e-174 614.8 432 70.1
Migut.L01612 Erythranthe guttata HOM05D005244 ORTHO05D006539 5.0e-173 611.7 504 62.9
DCAR_020446 Daucus carota HOM05D005244 ORTHO05D006539 6.5e-173 611.3 459 67.3
FvH4_4g03800 Fragaria vesca HOM05D005244 ORTHO05D006539 6.5e-173 611.3 444 69.4
FAN12G3076 Fragaria x ananassa HOM05D005244 ORTHO05D006539 6.5e-173 611.3 444 69.4
FAN12G3464 Fragaria x ananassa HOM05D005244 ORTHO05D006539 6.5e-173 611.3 444 69.4
MBI16_g40729_MAGBIO Magnolia biondii HOM05D005244 ORTHO05D006539 8.6e-173 610.9 461 67.5
Lsat_1_v5_gn_5_80020 Lactuca sativa HOM05D005244 ORTHO05D006539 1.1e-172 610.5 440 68.9
Potri.018G150600 Populus trichocarpa HOM05D005244 ORTHO05D006539 1.1e-172 610.5 408 72.8
RcHm_v2.0_Chr4g0393651 Rosa chinensis HOM05D005244 ORTHO05D006539 5.5e-172 608.2 443 68.4
Gohir.D08G027300 Gossypium hirsutum HOM05D005244 ORTHO05D006539 7.2e-172 607.8 443 67.0
THA.LOC104817833 Tarenaya hassleriana HOM05D005244 ORTHO05D006539 7.2e-172 607.8 438 66.4
Gorai.004G024200 Gossypium raimondii HOM05D005244 ORTHO05D006539 2.1e-171 606.3 443 67.0
CANSAT80G0544 Cannabis sativa HOM05D005244 ORTHO05D006539 8.0e-171 604.4 444 68.7
FAN22G0231 Fragaria x ananassa HOM05D005244 ORTHO05D006539 1.0e-170 604.0 448 67.6
Gohir.A08G016900 Gossypium hirsutum HOM05D005244 ORTHO05D006539 1.4e-170 603.6 443 66.8
arahy.Tifrunner.gnm1.ann1.MPB88K Arachis hypogaea HOM05D005244 ORTHO05D006539 5.2e-170 601.7 451 67.6
Sc25g0001730 Simmondsia chinensis HOM05D005244 ORTHO05D006539 6.8e-170 601.3 457 66.1
Aqoxy7G02584 Aquilegia oxysepala HOM05D005244 ORTHO05D006539 2.0e-169 599.7 438 66.9
HanXRQChr10g0309401 Helianthus annuus HOM05D005244 ORTHO05D006539 4.4e-169 598.6 447 65.3
ECA234G0362 Erigeron canadensis HOM05D005244 ORTHO05D006539 5.7e-169 598.2 440 66.4
Glyma.01G000900 Glycine max HOM05D005244 ORTHO05D006539 1.3e-168 597.0 448 66.7
vmacro20731 Vaccinium macrocarpon HOM05D005244 ORTHO05D006539 1.3e-168 597.0 483 64.2
arahy.Tifrunner.gnm1.ann1.GU0YFX Arachis hypogaea HOM05D005244 ORTHO05D006539 6.3e-168 594.7 451 67.2
Rhsim01G0102600 Rhododendron simsii HOM05D005244 ORTHO05D006539 1.4e-167 593.6 512 61.1
Haze_21246 Corylus avellana HOM05D005244 ORTHO05D006539 7.8e-166 587.8 501 61.9
SGA_v2.0_scaffold21G09589 Striga asiatica HOM05D005244 ORTHO05D006539 1.7e-165 586.6 440 67.7
ATR0626G132 Amborella trichopoda HOM05D005244 ORTHO05D006539 5.0e-165 585.1 442 66.3
EL10Ac2g03605 Beta vulgaris HOM05D005244 ORTHO05D006539 1.5e-164 583.6 437 65.2
AL8G34210 Arabidopsis lyrata HOM05D005244 ORTHO05D006539 2.5e-164 582.8 438 61.9
AT5G58100 Arabidopsis thaliana HOM05D005244 ORTHO05D006539 4.3e-164 582.0 450 61.3
AUR62020750 Chenopodium quinoa HOM05D005244 ORTHO05D006539 4.3e-164 582.0 457 64.1
PSO170G3502 Papaver somniferum HOM05D005244 ORTHO05D006539 9.5e-164 580.9 451 65.0
VMungo0464G0587 Vigna mungo HOM05D005244 ORTHO05D006539 1.2e-163 580.5 418 68.9
Solyc07g042910.4 Solanum lycopersicum HOM05D005244 ORTHO05D006539 1.6e-163 580.1 564 54.6
PSO063G2947 Papaver somniferum HOM05D005244 ORTHO05D006539 2.1e-163 579.7 451 64.7
AUR62027963 Chenopodium quinoa HOM05D005244 ORTHO05D006539 4.7e-163 578.6 463 62.9
Thhalv10012595m.g Eutrema salsugineum HOM05D005244 ORTHO05D006539 3.0e-162 575.9 451 61.0
TPR.G18623 Trifolium pratense HOM05D005244 ORTHO05D006539 5.2e-162 575.1 437 67.3
Carub.0008s1866 Capsella rubella HOM05D005244 ORTHO05D006539 5.8e-161 571.6 438 62.1
GSVIVG01034254001 Vitis vinifera HOM05D005244 ORTHO05D006539 4.9e-160 568.5 682 47.4
C09p50010 Brassica napus HOM05D005244 ORTHO05D006539 6.4e-160 568.2 438 62.3
Aa31LG3G13950 Aethionema arabicum HOM05D005244 ORTHO05D006539 8.3e-160 567.8 438 61.4
Sp6g19790 Schrenkiella parvula HOM05D005244 ORTHO05D006539 1.8e-159 566.6 438 61.9
BcaB08g36163 Brassica carinata HOM05D005244 ORTHO05D006539 2.4e-159 566.2 438 62.1
BcaC04g19907 Brassica carinata HOM05D005244 ORTHO05D006539 4.1e-159 565.5 438 62.1
Psat1g052040 Pisum sativum HOM05D005244 ORTHO05D006539 4.1e-159 565.5 446 65.0
Hund03212 Selenicereus undatus HOM05D005244 ORTHO05D006539 1.6e-158 563.5 442 63.3
CDE05G2480 Ceratophyllum demersum HOM05D005244 ORTHO05D006539 2.0e-158 563.1 445 62.0
Medtr5g019500 Medicago truncatula HOM05D005244 ORTHO05D006539 6.0e-158 561.6 446 65.7
Duzib168G0486 Durio zibethinus HOM05D005244 ORTHO05D006539 1.7e-157 560.1 443 64.1
Peaxi162Scf01347g00132 Petunia axillaris HOM05D005244 ORTHO05D006539 2.3e-157 559.7 371 73.9
Ca_25641_v3 Cicer arietinum L. HOM05D005244 ORTHO05D006539 1.9e-156 556.6 441 65.5
Lj2g0016843 Lotus japonicus HOM05D005244 ORTHO05D006539 1.2e-155 553.9 439 64.7
BolC9t57854H Brassica oleracea HOM05D005244 ORTHO05D006539 6.8e-154 548.1 477 57.0
BraA10t43621Z Brassica rapa HOM05D005244 ORTHO05D006539 1.2e-153 547.4 477 56.8
Ciclev10007431m.g Citrus clementina HOM05D005244 ORTHO05D006539 1.1e-151 540.8 361 73.4
Cc06_g23580 Coffea canephora HOM05D005244 ORTHO05D006539 1.0e-149 534.3 590 50.2
Glyma.08G360000 Glycine max HOM05D005244 ORTHO05D006539 9.9e-137 491.1 350 69.1
Zm00001eb240720 Zea mays HOM05D005244 ORTHO05D006539 1.3e-136 490.7 461 55.1
Cpa.g.sc91.76 Carica papaya HOM05D005244 ORTHO05D006539 2.4e-130 469.9 375 62.9
unitig_899.g15185 Utricularia gibba HOM05D005244 ORTHO05D006539 3.6e-123 446.0 415 55.4
Mapoly0125s0017 Marchantia polymorpha HOM05D005244 ORTHO05D006539 2.1e-107 393.7 421 46.3
Oeu021241.1 Olea europaea HOM05D005244 ORTHO05D006539 4.0e-106 389.4 382 56.5
HPP92_015784 Vanilla planifolia HOM05D005244 ORTHO05D006539 5.8e-105 385.6 419 51.3
Pp3c14_21030 Physcomitrium patens HOM05D005244 ORTHO05D006539 6.0e-102 375.6 458 44.1
SMO367G0058 Selaginella moellendorffii HOM05D005244 ORTHO05D006539 5.7e-100 369.0 403 44.4
Lalb_Chr22g0361681 Lupinus albus HOM05D005244 ORTHO05D006539 3.1e-98 363.2 282 64.9
Hund19348 Selenicereus undatus HOM05D005244 ORTHO05D006539 5.9e-81 305.8 418 44.0
HPP92_015795 Vanilla planifolia HOM05D005244 ORTHO05D006539 1.1e-76 291.6 270 55.2
Os02g0469200 Oryza sativa ssp. japonica HOM05D005244 ORTHO05D006539 1.5e-76 291.2 264 55.3
A10p16080 Brassica napus HOM05D005244 ORTHO05D006539 1.1e-74 285.0 438 39.0
HPP92_015817 Vanilla planifolia HOM05D005244 ORTHO05D006539 3.8e-72 276.6 298 50.7
Duzib170G1117 Durio zibethinus HOM05D005244 ORTHO05D006539 2.7e-62 243.8 162 72.2
CBR_g983 Chara braunii HOM05D005244 ORTHO05D006539 2.6e-60 237.3 496 31.9
HPP92_015814 Vanilla planifolia HOM05D005244 ORTHO05D006539 3.4e-60 236.9 252 51.6
QL01p000012 Quercus lobata HOM05D005244 ORTHO05D006539 2.7e-57 227.3 227 54.6
CBR_g22899 Chara braunii HOM05D005244 ORTHO05D006539 8.0e-54 215.7 491 32.8
HPP92_015815 Vanilla planifolia HOM05D005244 ORTHO05D006539 3.7e-51 206.8 164 61.0
SalBow7G2907 Salvia bowleyana HOM05D005244 ORTHO05D006539 6.3e-51 206.1 142 68.3
MBI16_g00817_MAGBIO Magnolia biondii HOM05D005244 ORTHO05D006539 3.1e-50 203.8 287 45.3
SalBow8G4401 Salvia bowleyana HOM05D005244 ORTHO05D006539 7.0e-50 202.6 142 66.9
SalBow6G0925 Salvia bowleyana HOM05D005244 ORTHO05D006539 4.0e-45 186.8 178 53.9
Zm00001eb270590 Zea mays HOM05D005244 ORTHO05D006539 4.9e-43 179.9 147 60.5
Zm00001eb016210 Zea mays HOM05D005244 ORTHO05D006539 5.4e-42 176.4 135 62.2
Zm00001eb175510 Zea mays HOM05D005244 ORTHO05D006539 1.2e-41 175.3 120 67.5
SalBow2G0201 Salvia bowleyana HOM05D005244 ORTHO05D006539 3.9e-40 170.2 111 73.0
Zm00001eb357680 Zea mays HOM05D005244 ORTHO05D006539 5.0e-40 169.9 119 66.4
MELO3C032112.2 Cucumis melo HOM05D000002 ORTHO05D000001 4.1e-34 150.2 94 78.7
Cre16.g680450 Chlamydomonas reinhardtii HOM05D005244 ORTHO05D006539 1.5e-31 141.7 454 28.0
HPP92_015816 Vanilla planifolia HOM05D005244 ORTHO05D006539 1.9e-31 141.4 85 70.6
MCO06G232 Micromonas commoda HOM05D005244 ORTHO05D006539 2.8e-30 137.5 414 25.8
Zm00001eb035880 Zea mays HOM05D005244 ORTHO05D006539 4.0e-29 133.7 90 65.6
HPP92_015796 Vanilla planifolia HOM05D005244 ORTHO05D006539 7.5e-28 129.4 164 45.7
HanXRQChr14g0448901 Helianthus annuus HOM05D005244 ORTHO05D006539 6.0e-25 119.8 100 56.0
Zm00001eb063080 Zea mays HOM05D005244 ORTHO05D006539 1.5e-23 115.2 86 62.8
CARHR271920 Cardamine hirsuta HOM05D005244 ORTHO05D006539 1.8e-21 108.2 63 81.0
SHI03161 Sapria himalayana HOM05D005244 ORTHO05D006539 4.2e-18 97.1 85 60.0
MELO3C028251.2 Cucumis melo HOM05D005244 ORTHO05D006539 5.6e-15 86.7 59 71.2
MBI16_g00818_MAGBIO Magnolia biondii HOM05D005244 ORTHO05D006539 1.4e-13 82.0 97 51.5


User provided reference genes

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