Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.2e-132 476.5 237 100.0
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.1e-124 449.1 239 93.3
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 2.7e-124 448.7 237 93.2
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 6.0e-124 447.6 237 92.8
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.2e-95 353.6 235 74.0
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.7e-92 342.4 227 71.4
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 3.6e-92 342.0 229 72.5
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 6.7e-91 337.8 238 69.7
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 1.7e-89 333.2 232 69.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.2e-89 332.8 209 76.1
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 6.3e-89 331.3 232 70.3
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 6.3e-89 331.3 240 68.3
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 8.2e-89 330.9 235 69.8
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.4e-88 330.1 202 77.7
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 9.1e-88 327.4 235 68.9
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.5e-87 326.6 234 67.1
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 3.4e-87 325.5 237 68.8
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.9e-86 322.4 234 67.1
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 3.8e-86 322.0 230 67.8
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 8.5e-86 320.9 209 72.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.1e-85 320.5 231 69.3
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.9e-85 319.7 206 72.8
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.6e-84 316.6 234 68.8
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.4e-83 313.5 201 73.1
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.8e-83 313.2 234 64.5
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 3.9e-83 312.0 234 63.7
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 6.7e-83 311.2 234 64.1
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 8.8e-83 310.8 234 62.8
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.1e-82 310.5 234 64.1
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.6e-82 309.3 235 63.0
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 2.6e-82 309.3 234 65.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 5.7e-82 308.1 234 62.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 9.7e-82 307.4 209 66.5
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 9.7e-82 307.4 230 66.5
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.8e-81 305.8 202 69.8
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 4.8e-81 305.1 234 64.1
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 6.3e-81 304.7 234 64.5
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.8e-80 303.1 198 71.2
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.8e-80 303.1 198 71.2
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.8e-80 303.1 200 69.5
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.1e-80 302.4 203 69.0
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 4.1e-80 302.0 198 73.2
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 4.1e-80 302.0 199 70.4
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 5.3e-80 301.6 233 62.7
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 7.0e-80 301.2 234 62.8
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 9.1e-80 300.8 230 63.9
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.2e-79 300.4 234 60.7
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.2e-79 300.4 239 61.9
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.5e-79 300.1 233 63.1
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.6e-79 299.3 234 62.0
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 5.9e-79 298.1 239 61.5
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.7e-78 296.6 232 64.2
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.2e-78 296.2 234 62.4
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 5.0e-78 295.0 234 60.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.9e-77 293.1 236 60.2
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 4.2e-77 292.0 203 69.0
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 4.2e-77 292.0 229 63.3
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 5.5e-77 291.6 229 59.8
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 9.4e-77 290.8 204 69.6
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.6e-76 290.0 205 67.8
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.1e-76 289.7 189 70.4
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 3.6e-76 288.9 234 61.1
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 3.6e-76 288.9 230 60.4
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 3.6e-76 288.9 203 65.5
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 3.6e-76 288.9 203 65.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 4.7e-76 288.5 211 64.0
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.1e-76 288.1 203 66.5
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 8.0e-76 287.7 233 61.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.8e-75 286.6 252 56.7
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 2.3e-75 286.2 205 67.3
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 3.0e-75 285.8 203 64.5
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.7e-75 284.6 235 59.6
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 6.7e-75 284.6 282 53.9
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.5e-74 283.5 206 66.5
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 5.7e-74 281.6 225 60.9
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 5.7e-74 281.6 179 73.2
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 9.7e-74 280.8 201 63.2
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.3e-73 280.4 235 60.9
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.8e-73 279.3 244 58.6
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 2.8e-73 279.3 205 62.4
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 7.0e-72 274.6 207 62.8
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 9.1e-72 274.2 223 60.5
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.1e-72 274.2 177 72.3
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 2.0e-71 273.1 202 62.4
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 2.0e-71 273.1 201 64.2
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.6e-71 272.7 202 62.9
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 6.5e-70 268.1 276 51.1
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.9e-69 266.5 253 56.1
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 3.2e-69 265.8 195 64.1
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 2.1e-68 263.1 231 57.1
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 3.6e-68 262.3 198 61.6
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 4.7e-68 261.9 234 57.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 4.0e-67 258.8 223 55.2
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.2e-63 247.3 202 55.9
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.5e-63 245.7 175 67.4
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.0e-62 244.2 175 68.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 6.5e-62 241.5 179 62.0
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.0e-59 232.6 164 69.5
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 6.3e-57 224.9 201 49.8
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 2.4e-56 223.0 160 63.8
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 2.7e-55 219.5 168 64.9
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.6e-52 210.3 144 72.9
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.6e-50 203.0 178 61.8
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 4.7e-44 182.2 136 66.9
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.0e-44 181.4 167 53.9
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.3e-43 179.9 163 58.9
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.0e-38 164.5 112 66.1
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.1e-35 154.5 106 67.0
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 4.4e-34 149.1 94 73.4
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.9e-33 145.6 87 78.2
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 6.2e-28 128.6 110 61.8
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.1e-27 127.9 91 62.6
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.8e-27 127.1 91 68.1
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-26 124.4 84 70.2
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 2.6e-26 123.2 92 68.5
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 2.7e-23 113.2 84 64.3
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 5.6e-21 105.5 85 57.6
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 9.6e-21 104.8 70 70.0
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 1.6e-20 104.0 87 55.2
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 3.6e-20 102.8 78 62.8
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 6.2e-20 102.1 79 51.9
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.9e-13 80.5 67 56.7
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 3.3e-13 79.7 67 50.7
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 6.4e-09 65.5 52 63.5


User provided reference genes

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