Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.0e-31 140.6 152 100.0
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 3.1e-17 92.4 64 73.4
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 3.1e-17 92.4 67 74.6
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.2e-16 90.5 58 77.6
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 5.9e-16 88.2 64 68.8
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 7.8e-16 87.8 61 67.2
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 1.0e-15 87.4 64 68.8
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 1.0e-15 87.4 135 81.5
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 2.3e-15 86.3 68 70.6
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 3.8e-15 85.5 61 68.9
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 5.0e-15 85.1 63 71.4
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 6.6e-15 84.7 53 77.4
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 1.1e-14 84.0 62 69.4
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 1.1e-14 84.0 58 69.0
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.1e-14 84.0 61 67.2
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 1.5e-14 83.6 53 79.2
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 1.9e-14 83.2 62 66.1
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 2.5e-14 82.8 68 63.2
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.5e-14 82.8 61 65.6
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 3.3e-14 82.4 56 71.4
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 3.3e-14 82.4 56 71.4
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 3.3e-14 82.4 54 74.1
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 3.3e-14 82.4 61 67.2
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 3.3e-14 82.4 69 66.7
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 3.3e-14 82.4 148 79.7
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 4.3e-14 82.0 58 72.4
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 4.3e-14 82.0 139 81.3
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 4.3e-14 82.0 55 74.5
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 5.6e-14 81.6 55 74.5
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 7.3e-14 81.3 49 81.6
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 7.3e-14 81.3 59 71.2
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 9.5e-14 80.9 68 69.1
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 9.5e-14 80.9 68 69.1
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 9.5e-14 80.9 55 70.9
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 9.5e-14 80.9 55 74.5
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 9.5e-14 80.9 148 77.0
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 9.5e-14 80.9 148 77.0
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 1.2e-13 80.5 56 69.6
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 1.6e-13 80.1 51 74.5
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 2.1e-13 79.7 68 64.7
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 2.1e-13 79.7 77 61.0
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 2.1e-13 79.7 51 76.5
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 3.6e-13 79.0 52 73.1
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 4.7e-13 78.6 51 76.5
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 6.1e-13 78.2 67 64.2
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 6.1e-13 78.2 64 67.2
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 6.1e-13 78.2 135 76.3
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 6.1e-13 78.2 135 76.3
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 6.1e-13 78.2 51 72.5
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 6.1e-13 78.2 51 72.5
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 6.1e-13 78.2 139 76.3
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 8.0e-13 77.8 51 76.5
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 8.0e-13 77.8 51 72.5
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 1.0e-12 77.4 51 74.5
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 1.0e-12 77.4 57 71.9
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 1.0e-12 77.4 51 74.5
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.0e-12 77.4 63 66.7
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 1.4e-12 77.0 64 65.6
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.8e-12 76.6 67 62.7
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 1.8e-12 76.6 51 74.5
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.8e-12 76.6 65 67.7
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 2.3e-12 76.3 51 74.5
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 3.0e-12 75.9 55 74.5
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 3.0e-12 75.9 49 73.5
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 4.0e-12 75.5 68 61.8
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 4.0e-12 75.5 53 69.8
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 4.0e-12 75.5 55 69.1
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 5.2e-12 75.1 64 62.5
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 5.2e-12 75.1 49 71.4
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 5.2e-12 75.1 51 74.5
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 5.2e-12 75.1 52 73.1
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 6.8e-12 74.7 51 70.6
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 6.8e-12 74.7 47 74.5
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 8.9e-12 74.3 55 67.3
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 1.2e-11 73.9 53 64.2
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 1.5e-11 73.6 51 72.5
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 1.5e-11 73.6 51 72.5
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 1.5e-11 73.6 51 72.5
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 1.5e-11 73.6 51 72.5
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 1.5e-11 73.6 65 56.9
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 2.0e-11 73.2 64 65.6
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 2.0e-11 73.2 62 61.3
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 3.4e-11 72.4 50 76.0
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 4.4e-11 72.0 48 72.9
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 5.7e-11 71.6 49 71.4
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 5.7e-11 71.6 64 60.9
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 7.5e-11 71.2 72 55.6
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 2.2e-10 69.7 53 62.3
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 4.9e-10 68.6 55 67.3
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 1.1e-09 67.4 47 68.1
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 1.8e-09 66.6 43 72.1
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 3.2e-09 65.9 64 56.2
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 4.1e-09 65.5 44 77.3
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 1.2e-08 63.9 61 55.7
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 5.9e-08 61.6 53 62.3
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 1.0e-07 60.8 46 65.2
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 1.0e-07 60.8 52 61.5
Cre12.g484500 Chlamydomonas reinhardtii HOM05D007144 ORTHO05D008709 1.7e-07 60.1 60 50.0
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 2.3e-07 59.7 58 51.7
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 6.6e-07 58.2 37 70.3
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 1.9e-06 56.6 32 87.5
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 2.5e-06 56.2 52 55.8
ClCG02G022890 Citrullus lanatus HOM05D007144 ORTHO05D008709 9.5e-06 54.3 165 60.0


User provided reference genes

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