Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 6.4e-76 287.3 147 100.0
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.5e-53 213.0 153 73.9
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.0e-53 212.6 151 74.2
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 4.7e-50 201.4 163 68.1
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 4.5e-45 184.9 229 50.7
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.3e-31 140.2 142 52.1
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.1e-30 137.1 149 53.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 3.1e-30 135.6 129 55.8
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 3.1e-30 135.6 144 54.2
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 7.0e-30 134.4 129 55.8
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.6e-29 133.3 155 51.0
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 1.6e-29 133.3 144 52.8
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 2.0e-29 132.9 135 55.6
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 3.5e-29 132.1 135 54.8
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.3e-28 130.2 155 51.6
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 2.2e-28 129.4 135 54.8
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 2.9e-28 129.0 130 54.6
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 2.9e-28 129.0 134 52.2
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 3.8e-28 128.6 134 52.2
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 8.5e-28 127.5 153 51.6
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 1.5e-27 126.7 145 51.7
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.5e-27 126.7 131 51.9
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.5e-27 126.7 130 55.4
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 1.5e-27 126.7 132 56.1
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 1.5e-27 126.7 130 54.6
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.9e-27 126.3 127 54.3
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 2.5e-27 125.9 130 54.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 2.5e-27 125.9 134 53.7
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 3.2e-27 125.6 136 50.7
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 3.2e-27 125.6 153 49.0
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 4.2e-27 125.2 130 55.4
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 5.5e-27 124.8 150 50.0
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 5.5e-27 124.8 142 54.2
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 5.5e-27 124.8 142 54.2
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 5.5e-27 124.8 130 53.8
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 7.2e-27 124.4 135 51.1
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 9.4e-27 124.0 153 48.4
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.2e-26 123.6 130 52.3
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.2e-26 123.6 145 50.3
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 1.6e-26 123.2 147 49.0
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 2.1e-26 122.9 130 51.5
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 4.7e-26 121.7 158 48.1
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 6.1e-26 121.3 130 55.4
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 8.0e-26 120.9 142 50.0
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 1.0e-25 120.6 146 47.3
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 1.8e-25 119.8 130 50.8
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.8e-25 119.8 155 49.7
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.3e-25 119.4 134 46.3
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 2.3e-25 119.4 137 48.9
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.2e-25 118.2 134 50.0
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 6.8e-25 117.9 136 50.0
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 8.8e-25 117.5 136 50.0
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 8.8e-25 117.5 127 49.6
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 1.2e-24 117.1 134 50.0
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.2e-24 117.1 129 50.4
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 1.5e-24 116.7 127 49.6
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 2.0e-24 116.3 134 48.5
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 4.4e-24 115.2 129 52.7
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 4.4e-24 115.2 127 50.4
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 4.4e-24 115.2 131 49.6
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 5.7e-24 114.8 128 50.8
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 9.8e-24 114.0 135 45.9
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 9.8e-24 114.0 134 47.8
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 1.7e-23 113.2 133 46.6
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 2.2e-23 112.8 127 49.6
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 2.8e-23 112.5 135 45.2
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 3.7e-23 112.1 130 46.9
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.7e-23 112.1 131 45.8
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 4.8e-23 111.7 124 49.2
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 6.3e-23 111.3 132 51.5
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.1e-22 110.5 134 44.0
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 1.8e-22 109.8 137 43.8
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.4e-22 109.4 134 47.0
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 2.4e-22 109.4 143 46.2
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 4.1e-22 108.6 137 43.1
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 4.1e-22 108.6 137 43.1
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 4.1e-22 108.6 137 43.1
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 5.4e-22 108.2 134 44.0
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 7.0e-22 107.8 137 42.3
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 3.5e-21 105.5 125 45.6
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 5.9e-21 104.8 217 35.9
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 2.3e-20 102.8 137 43.8
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 3.8e-20 102.1 132 45.5
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 3.8e-20 102.1 132 44.7
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 6.6e-20 101.3 129 42.6
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 1.5e-19 100.1 132 47.0
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 2.5e-19 99.4 129 45.0
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 9.5e-19 97.4 130 43.1
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.1e-18 96.3 130 43.1
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 4.7e-18 95.1 145 44.8
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.0e-17 92.4 111 45.9
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 4.0e-17 92.0 135 40.0
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 5.2e-17 91.7 111 45.0
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 6.8e-17 91.3 124 41.1
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.2e-16 90.5 132 46.2
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.6e-16 89.4 146 39.0
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 4.4e-16 88.6 131 41.2
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 1.3e-15 87.0 151 39.7
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 1.8e-14 83.2 118 40.7
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 7.0e-14 81.3 80 51.2
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 7.0e-14 81.3 127 40.9
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 1.2e-13 80.5 68 55.9
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 1.6e-13 80.1 89 48.3
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 5.0e-12 75.1 145 39.3
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 9.5e-11 70.9 130 40.0
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 9.5e-11 70.9 70 51.4
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 2.1e-10 69.7 128 32.8
Actinidia18153 Actinidia chinensis HOM05D003443 ORTHO05D008640 9.8e-08 60.8 61 57.4
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 3.7e-07 58.9 74 45.9
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 8.3e-07 57.8 127 33.1


User provided reference genes

Program Settings