Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 1.8e-176 622.5 312 100.0
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 2.8e-145 518.8 307 86.3
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 1.5e-135 486.5 324 78.4
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 7.6e-135 484.2 411 65.0
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 1.8e-120 436.4 287 77.7
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 2.0e-119 433.0 261 78.9
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 7.7e-119 431.0 303 71.6
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.3e-118 430.3 267 78.7
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 6.1e-116 421.4 312 69.2
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 1.0e-115 420.6 291 74.2
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 1.0e-115 420.6 273 77.3
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 1.4e-115 420.2 304 69.1
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 1.8e-115 419.9 270 75.6
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 3.9e-115 418.7 266 76.7
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 5.1e-115 418.3 269 75.1
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 8.8e-115 417.5 293 72.0
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 1.1e-114 417.2 265 75.5
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 1.1e-114 417.2 291 73.5
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 1.1e-114 417.2 258 78.3
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 3.3e-114 415.6 291 73.5
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 3.3e-114 415.6 270 75.9
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 3.3e-114 415.6 270 75.9
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 4.4e-114 415.2 304 69.4
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 5.7e-114 414.8 296 70.6
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 5.7e-114 414.8 258 77.9
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 7.4e-114 414.5 291 72.9
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 7.4e-114 414.5 306 70.3
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 7.4e-114 414.5 272 75.0
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 1.3e-113 413.7 287 70.7
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 1.3e-113 413.7 286 74.1
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 1.3e-113 413.7 305 68.5
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 2.2e-113 412.9 273 75.8
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 2.2e-113 412.9 266 75.2
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 2.8e-113 412.5 275 73.8
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 3.7e-113 412.1 307 67.1
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 4.8e-113 411.8 269 74.3
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 4.8e-113 411.8 271 73.8
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 8.2e-113 411.0 273 75.1
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 1.4e-112 410.2 269 74.7
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 1.4e-112 410.2 293 72.0
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 1.8e-112 409.8 268 74.3
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 4.1e-112 408.7 266 74.8
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 6.9e-112 407.9 273 74.7
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 6.9e-112 407.9 313 68.1
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 1.2e-111 407.1 269 72.9
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 1.2e-111 407.1 300 68.7
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 2.0e-111 406.4 273 74.7
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 4.5e-111 405.2 271 73.4
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 1.0e-110 404.1 273 72.5
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 1.7e-110 403.3 276 70.7
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 2.2e-110 402.9 274 74.5
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 3.8e-110 402.1 269 73.6
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 3.8e-110 402.1 273 71.1
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 1.9e-109 399.8 316 66.5
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 2.5e-109 399.4 294 67.0
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 4.2e-109 398.7 330 62.1
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 4.2e-109 398.7 273 71.8
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 4.2e-109 398.7 313 67.1
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 5.5e-109 398.3 281 69.8
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 5.5e-109 398.3 264 72.7
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 9.4e-109 397.5 281 69.8
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 2.1e-108 396.4 272 73.5
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 3.6e-108 395.6 311 63.7
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 7.9e-108 394.4 282 67.7
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 1.4e-107 393.7 275 72.7
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 1.4e-107 393.7 275 72.7
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 1.8e-107 393.3 276 72.5
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 2.3e-107 392.9 273 72.5
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 1.7e-105 386.7 261 70.1
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 8.2e-105 384.4 349 59.9
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 1.1e-104 384.0 264 70.1
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 1.4e-104 383.6 247 73.3
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 4.1e-104 382.1 266 71.1
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-103 380.2 238 78.6
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 3.5e-103 379.0 266 70.7
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 4.5e-103 378.6 279 68.8
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 4.5e-103 378.6 279 68.8
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 4.5e-103 378.6 273 68.5
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 5.9e-103 378.3 286 66.8
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 5.9e-103 378.3 289 65.1
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 7.7e-103 377.9 232 78.9
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 1.0e-102 377.5 306 64.1
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 1.7e-102 376.7 266 69.2
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 2.2e-102 376.3 285 65.3
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 5.0e-102 375.2 298 63.1
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 6.5e-102 374.8 231 78.4
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 6.5e-102 374.8 231 79.2
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 5.5e-101 371.7 279 67.4
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 5.5e-101 371.7 317 60.3
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 2.3e-99 366.3 350 56.9
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 1.2e-98 364.0 247 70.0
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.6e-98 362.8 247 69.2
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 5.7e-98 361.7 232 75.9
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 2.4e-96 356.3 268 64.9
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 8.5e-94 347.8 293 62.8
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 1.5e-93 347.1 262 67.6
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 9.1e-88 327.8 194 80.4
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 1.0e-86 324.3 255 60.4
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 3.8e-86 322.4 250 62.8
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 4.2e-85 318.9 237 68.4
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 5.5e-85 318.5 247 64.8
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 8.8e-83 311.2 253 59.7
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 2.7e-79 299.7 232 69.4
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 1.3e-73 280.8 230 62.6
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 2.9e-73 279.6 197 66.0
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 5.4e-72 275.4 212 68.4
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 8.6e-70 268.1 188 69.1
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 7.3e-69 265.0 211 65.4
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 4.7e-68 262.3 172 77.9
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 8.3e-65 251.5 157 77.7
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 9.2e-64 248.1 174 68.4
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 1.0e-62 244.6 200 65.0
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 3.1e-59 233.0 195 60.0
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 3.2e-56 223.0 130 83.8
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 1.6e-55 220.7 177 65.5
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 6.6e-54 215.3 172 65.1
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 1.0e-46 191.4 157 65.0
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-46 191.0 157 64.3
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 2.3e-46 190.3 156 65.4
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 3.9e-46 189.5 229 49.3
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 6.6e-46 188.7 157 64.3
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-45 187.2 173 59.5
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 3.3e-45 186.4 157 65.0
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 9.6e-45 184.9 122 68.9
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 9.6e-45 184.9 157 63.1
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 6.2e-44 182.2 156 62.8
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-43 179.5 158 61.4
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 3.2e-40 169.9 113 77.0
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 5.4e-40 169.1 144 63.9
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 3.9e-38 162.9 157 59.2
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 3.9e-38 162.9 177 56.5
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 7.3e-37 158.7 98 79.6
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-35 152.9 160 55.6
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-35 152.9 160 55.6
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 6.9e-35 152.1 100 75.0
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 2.6e-34 150.2 227 40.5
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.7e-33 147.5 95 77.9
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 3.8e-33 146.4 94 77.7
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 8.4e-33 145.2 125 62.4
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 8.4e-33 145.2 123 63.4
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.3e-28 131.3 88 68.2
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 5.3e-27 125.9 156 50.0
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 1.1e-24 118.2 109 58.7
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 5.5e-24 115.9 74 73.0
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 9.6e-21 105.1 66 80.3
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 3.7e-20 103.2 133 45.9
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 3.4e-18 96.7 56 80.4
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 1.7e-17 94.4 101 52.5
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 2.1e-15 87.4 57 70.2
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 2.3e-14 84.0 89 52.8
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 5.5e-08 62.8 111 36.9
MELO3C034534.2 Cucumis melo HOM05D004703 ORTHO05D005801 6.1e-07 59.3 38 71.1
arahy.Tifrunner.gnm1.ann1.54H2MY Arachis hypogaea HOM05D001155 ORTHO05D015979 2.3e-06 57.4 37 73.0
arahy.Tifrunner.gnm1.ann1.5AIV52 Arachis hypogaea HOM05D001155 ORTHO05D001080 3.0e-06 57.0 36 72.2
Oeu044815.2 Olea europaea HOM05D002525 ORTHO05D002727 3.0e-06 57.0 46 52.2
arahy.Tifrunner.gnm1.ann1.CXRB51 Arachis hypogaea HOM05D004703 ORTHO05D015979 5.1e-06 56.2 35 74.3


User provided reference genes

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