Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.4e-134 483.0 259 100.0
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 2.3e-100 369.4 259 78.0
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 2.1e-98 362.8 263 78.3
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 1.3e-95 353.6 263 74.9
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 6.4e-95 351.3 263 75.7
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.5e-67 260.4 268 53.0
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 9.6e-67 257.7 266 53.4
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.3e-66 257.3 194 65.5
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 1.6e-66 256.9 191 64.9
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 8.2e-66 254.6 249 57.4
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 2.4e-65 253.1 251 55.8
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 3.1e-65 252.7 190 65.8
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 4.0e-65 252.3 263 53.2
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 4.0e-65 252.3 191 69.1
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 5.3e-65 251.9 251 53.4
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.3e-65 251.9 190 65.3
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 6.9e-65 251.5 191 66.0
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 9.0e-65 251.1 192 65.1
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.5e-64 250.4 192 64.6
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 2.0e-64 250.0 264 52.7
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 2.6e-64 249.6 190 65.3
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 4.5e-64 248.8 277 52.0
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 4.5e-64 248.8 190 64.7
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 7.6e-64 248.1 261 54.4
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 7.6e-64 248.1 192 65.6
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 7.6e-64 248.1 192 65.6
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.0e-63 247.7 264 55.7
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.0e-63 247.7 241 54.8
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.2e-63 246.5 261 56.7
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 2.2e-63 246.5 266 52.6
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 2.9e-63 246.1 251 52.6
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.9e-63 246.1 265 52.5
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 4.9e-63 245.4 196 62.2
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 8.4e-63 244.6 184 66.3
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-62 244.2 192 64.6
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.9e-62 243.4 189 64.0
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 1.9e-62 243.4 275 50.2
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 1.9e-62 243.4 193 63.7
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 2.5e-62 243.0 265 58.5
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 2.5e-62 243.0 240 55.0
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 3.2e-62 242.7 251 52.6
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.2e-62 242.7 262 56.1
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 4.2e-62 242.3 260 53.5
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 7.1e-62 241.5 271 55.4
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 1.2e-61 240.7 238 55.9
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 1.6e-61 240.4 254 53.9
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.6e-61 240.4 189 64.0
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 3.5e-61 239.2 262 50.4
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.8e-60 236.9 189 61.4
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 2.3e-60 236.5 195 63.6
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 3.9e-60 235.7 196 62.2
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 5.1e-60 235.3 204 58.8
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 8.7e-60 234.6 265 50.6
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 8.7e-60 234.6 260 53.8
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 8.7e-60 234.6 260 53.8
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.1e-59 234.2 184 62.5
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-59 234.2 262 55.7
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.9e-59 233.4 178 64.6
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 2.5e-59 233.0 191 62.8
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 4.3e-59 232.3 167 66.5
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 9.7e-59 231.1 250 54.4
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.6e-58 230.3 264 56.4
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 2.2e-58 229.9 189 61.4
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 4.8e-58 228.8 280 53.2
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 4.8e-58 228.8 204 58.3
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 4.8e-58 228.8 209 56.5
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 6.3e-58 228.4 249 53.4
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 8.2e-58 228.0 215 55.8
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 1.1e-57 227.6 188 60.1
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 1.8e-57 226.9 195 59.5
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 1.8e-57 226.9 269 56.9
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 3.1e-57 226.1 194 56.7
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 3.1e-57 226.1 190 61.1
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 5.3e-57 225.3 216 55.6
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 1.5e-56 223.8 273 48.4
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 2.0e-56 223.4 225 53.8
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 2.6e-56 223.0 194 59.3
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 4.5e-56 222.2 188 59.0
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 7.7e-56 221.5 188 58.5
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 1.0e-55 221.1 199 60.3
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 1.3e-55 220.7 194 57.2
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 1.3e-55 220.7 191 60.2
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 2.2e-55 219.9 198 59.6
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 3.8e-55 219.2 197 57.9
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 3.8e-55 219.2 197 57.9
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 3.8e-55 219.2 197 57.9
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 3.8e-55 219.2 213 54.9
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 3.8e-55 219.2 199 59.8
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 5.0e-55 218.8 201 60.2
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 8.5e-55 218.0 191 57.6
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 8.5e-55 218.0 191 58.1
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 1.1e-54 217.6 188 59.6
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.1e-54 217.6 191 57.6
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.1e-54 217.6 197 58.4
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 1.1e-54 217.6 191 59.2
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 1.1e-54 217.6 194 59.3
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 1.4e-54 217.2 191 56.0
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.9e-54 216.9 194 58.2
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 3.2e-54 216.1 197 58.4
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 9.4e-54 214.5 191 55.0
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 9.4e-54 214.5 250 54.4
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 1.6e-53 213.8 199 56.8
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 3.6e-53 212.6 262 50.4
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 4.6e-53 212.2 237 55.7
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 8.8e-52 208.0 211 50.2
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 1.1e-49 201.1 157 60.5
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.8e-49 200.3 195 53.8
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.0e-48 196.8 273 49.8
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 6.3e-42 175.3 139 58.3
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 2.0e-40 170.2 147 53.7
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 6.5e-39 165.2 179 48.0
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 1.9e-38 163.7 259 42.5
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 4.2e-38 162.5 177 46.9
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 7.2e-38 161.8 195 49.2
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.2e-37 161.0 146 52.7
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 4.7e-37 159.1 146 52.7
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.0e-36 157.9 156 50.0
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 2.2e-31 140.2 111 61.3
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 2.9e-31 139.8 183 41.5
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 1.1e-30 137.9 164 45.1
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 2.3e-28 130.2 172 41.9
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 4.8e-26 122.5 112 58.9


User provided reference genes

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