Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 8.3e-182 640.2 310 100.0
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 1.0e-160 570.1 310 89.0
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.9e-154 549.3 310 84.8
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 4.0e-152 541.6 324 81.2
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 2.8e-137 492.3 350 71.7
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 2.0e-135 486.1 310 72.9
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 5.8e-135 484.6 303 74.9
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 7.6e-135 484.2 311 73.0
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.6e-132 476.5 305 71.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.1e-132 476.1 310 71.6
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 4.6e-132 474.9 305 71.1
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 1.0e-131 473.8 310 71.0
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 2.5e-130 469.2 305 72.1
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 6.2e-129 464.5 310 71.3
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.8e-128 463.0 308 69.8
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 2.4e-128 462.6 305 71.8
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.1e-128 462.2 305 71.1
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 6.9e-128 461.1 310 69.0
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 6.9e-128 461.1 307 71.0
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 9.0e-128 460.7 316 68.7
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 4.5e-127 458.4 305 69.5
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 7.6e-127 457.6 310 70.3
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.3e-126 456.8 303 70.3
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 2.9e-126 455.7 305 70.5
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 6.4e-126 454.5 305 69.8
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 2.4e-125 452.6 305 70.5
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 5.4e-125 451.4 310 66.5
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 7.1e-125 451.1 305 69.8
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 9.3e-125 450.7 310 68.1
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 2.7e-124 449.1 308 68.8
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 6.0e-124 448.0 307 67.1
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 7.9e-124 447.6 311 68.8
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.8e-123 446.4 310 67.1
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.8e-123 446.4 311 69.1
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 3.0e-123 445.7 307 67.1
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 3.9e-123 445.3 310 69.0
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 5.1e-123 444.9 310 67.4
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.5e-122 443.4 306 68.0
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 2.5e-122 442.6 336 63.7
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.3e-122 442.2 310 66.5
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.8e-121 439.1 310 67.4
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 3.7e-121 438.7 303 68.0
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 6.2e-121 438.0 281 72.6
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 6.2e-121 438.0 305 67.2
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 8.1e-121 437.6 310 66.8
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 8.1e-121 437.6 310 66.8
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 8.1e-121 437.6 311 67.5
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 3.1e-120 435.6 305 66.2
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 6.9e-120 434.5 306 66.7
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 9.0e-120 434.1 303 66.3
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 1.2e-119 433.7 310 66.1
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 1.2e-119 433.7 276 71.7
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 3.4e-119 432.2 301 67.8
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.4e-119 432.2 305 65.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 4.5e-119 431.8 302 67.5
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 4.5e-119 431.8 310 64.2
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 4.5e-119 431.8 310 64.5
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 4.9e-118 428.3 310 65.8
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 6.4e-118 427.9 310 65.8
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 6.4e-118 427.9 305 67.2
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 8.4e-118 427.6 305 65.2
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.4e-117 426.8 305 64.6
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.4e-117 426.8 305 64.6
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.2e-117 425.6 315 63.5
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 5.5e-117 424.9 307 64.5
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 1.6e-116 423.3 310 65.2
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.5e-116 422.2 302 65.6
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.5e-116 422.2 289 69.6
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 1.0e-115 420.6 310 64.5
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 1.0e-115 420.6 302 63.6
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 1.3e-115 420.2 316 63.6
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 1.8e-115 419.9 305 64.3
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 5.1e-115 418.3 282 71.3
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 5.1e-115 418.3 334 59.9
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.9e-114 416.4 310 63.5
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.9e-114 416.4 338 58.9
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 5.6e-114 414.8 302 64.2
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 1.6e-113 413.3 302 64.2
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.8e-113 412.5 293 64.2
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.8e-112 409.8 305 63.3
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 2.4e-112 409.5 310 63.9
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 5.3e-112 408.3 298 65.4
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.9e-112 407.9 282 69.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.5e-111 406.8 308 62.0
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.7e-110 403.3 304 63.8
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 6.5e-110 401.4 310 61.6
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.5e-110 401.4 283 67.1
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 2.7e-108 396.0 283 66.4
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 7.4e-106 387.9 288 66.7
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.6e-105 386.7 368 54.1
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 4.8e-105 385.2 330 57.6
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 6.9e-104 381.3 310 60.0
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 3.4e-95 352.4 302 58.6
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.7e-94 350.1 313 56.5
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 5.5e-93 345.1 308 56.5
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.2e-92 344.0 302 55.3
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.0e-91 339.3 305 55.4
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 5.7e-90 335.1 302 55.6
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.2e-89 333.2 298 54.7
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 2.8e-89 332.8 315 54.6
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 3.1e-88 329.3 282 59.2
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.3e-86 323.9 251 60.6
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 2.9e-86 322.8 218 69.3
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 6.1e-84 315.1 230 65.2
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.8e-83 313.5 283 55.8
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.8e-81 305.4 301 51.5
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.1e-72 277.7 311 46.0
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.8e-72 276.9 192 69.8
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 7.0e-72 275.0 197 64.5
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 9.4e-69 264.6 201 63.7
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.4e-67 260.8 167 74.3
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 5.2e-67 258.8 200 61.0
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 1.2e-63 247.7 194 59.3
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.2e-63 247.7 235 54.5
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 1.9e-61 240.4 213 55.4
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 8.6e-54 214.9 206 54.4
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 3.0e-51 206.5 342 35.4
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 2.0e-50 203.8 137 69.3
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 2.2e-49 200.3 305 39.7
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 3.9e-46 189.5 149 58.4
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 2.8e-44 183.3 170 54.1
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 4.6e-39 166.0 131 61.1
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 5.0e-38 162.5 302 34.4
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 3.4e-34 149.8 291 35.7
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.9e-33 146.7 105 62.9
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 7.3e-29 132.1 113 53.1
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 4.0e-27 126.3 279 30.1
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 4.9e-25 119.4 83 63.9
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 1.2e-23 114.8 97 52.6
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.9e-17 92.8 83 56.6
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 5.6e-13 79.3 53 69.8
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 7.3e-13 79.0 154 35.7
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.8e-12 76.3 79 48.1
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 8.4e-09 65.5 62 48.4
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 1.4e-08 64.7 59 52.5
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 4.2e-08 63.2 91 41.8
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 2.7e-07 60.5 36 80.6


User provided reference genes

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