Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 2.9e-41 171.8 109 100.0
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 4.3e-16 88.2 69 66.7
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 4.3e-16 88.2 69 66.7
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 2.1e-15 85.9 70 64.3
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 4.7e-15 84.7 69 65.2
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 4.7e-15 84.7 49 83.7
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 6.1e-15 84.3 65 66.2
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 8.0e-15 84.0 69 63.8
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 8.0e-15 84.0 75 60.0
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.8e-14 82.8 45 88.9
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.8e-14 82.8 49 81.6
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 2.3e-14 82.4 70 62.9
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 4.0e-14 81.6 42 88.1
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 5.2e-14 81.3 42 92.9
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 5.2e-14 81.3 42 92.9
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 5.2e-14 81.3 42 92.9
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 5.2e-14 81.3 42 92.9
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 5.2e-14 81.3 42 92.9
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 5.2e-14 81.3 70 64.3
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 8.9e-14 80.5 70 64.3
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 1.2e-13 80.1 45 86.7
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 1.2e-13 80.1 44 88.6
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 1.5e-13 79.7 48 79.2
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.5e-13 79.7 45 86.7
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 1.5e-13 79.7 60 66.7
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 2.0e-13 79.3 41 92.7
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 2.0e-13 79.3 41 92.7
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 2.0e-13 79.3 56 67.9
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 2.0e-13 79.3 42 88.1
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 2.0e-13 79.3 42 90.5
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 2.6e-13 79.0 47 80.9
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 4.4e-13 78.2 45 84.4
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 4.4e-13 78.2 45 84.4
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 4.4e-13 78.2 44 88.6
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 4.4e-13 78.2 49 81.6
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 5.8e-13 77.8 41 85.4
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 5.8e-13 77.8 42 88.1
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 5.8e-13 77.8 42 88.1
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 5.8e-13 77.8 42 88.1
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 7.5e-13 77.4 40 92.5
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 7.5e-13 77.4 72 56.9
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.5e-13 77.4 73 57.5
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 7.5e-13 77.4 42 90.5
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 9.8e-13 77.0 42 85.7
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 9.8e-13 77.0 45 77.8
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 9.8e-13 77.0 58 69.0
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 9.8e-13 77.0 41 82.9
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 1.7e-12 76.3 75 60.0
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 1.7e-12 76.3 67 62.7
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 1.7e-12 76.3 53 73.6
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 2.2e-12 75.9 41 87.8
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 2.9e-12 75.5 78 53.8
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 2.9e-12 75.5 41 87.8
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 3.7e-12 75.1 36 91.7
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 3.7e-12 75.1 36 91.7
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 3.7e-12 75.1 36 91.7
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 4.9e-12 74.7 40 85.0
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 4.9e-12 74.7 48 77.1
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 4.9e-12 74.7 42 85.7
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 6.4e-12 74.3 38 84.2
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 6.4e-12 74.3 35 94.3
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 8.3e-12 73.9 35 94.3
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 1.1e-11 73.6 47 74.5
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 1.9e-11 72.8 88 64.8
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 1.9e-11 72.8 33 97.0
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.4e-11 72.4 63 54.0
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 3.2e-11 72.0 65 56.9
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 3.2e-11 72.0 41 78.0
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 3.2e-11 72.0 39 84.6
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 3.2e-11 72.0 40 87.5
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 4.1e-11 71.6 38 84.2
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 4.1e-11 71.6 45 73.3
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 5.4e-11 71.2 39 79.5
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 7.0e-11 70.9 45 73.3
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 9.2e-11 70.5 87 64.4
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 1.2e-10 70.1 87 64.4
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 1.2e-10 70.1 59 59.3
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.0e-10 69.3 38 78.9
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.0e-10 69.3 38 78.9
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 2.7e-10 68.9 39 74.4
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 2.7e-10 68.9 58 63.8
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 3.5e-10 68.6 70 54.3
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 6.0e-10 67.8 39 76.9
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 6.0e-10 67.8 39 76.9
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 1.0e-09 67.0 40 72.5
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 1.0e-09 67.0 37 75.7
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 1.3e-09 66.6 60 60.0
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 1.7e-09 66.2 60 55.0
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.3e-09 65.9 36 77.8
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.3e-09 65.9 34 82.4
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 3.0e-09 65.5 72 47.2
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 3.9e-09 65.1 47 72.3
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 2.5e-08 62.4 53 62.3
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 3.3e-08 62.0 81 46.9
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 3.3e-08 62.0 39 79.5
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 5.6e-08 61.2 53 52.8
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 4.7e-07 58.2 67 49.3


User provided reference genes

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