Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027889 Sechium edule HOM05D001461 ORTHO05D002801 6.3e-45 183.7 92 100.0
ClCG01G002120 Citrullus lanatus HOM05D001461 ORTHO05D002801 5.0e-34 147.5 92 81.5
Sed0019429 Sechium edule HOM05D001461 ORTHO05D002801 5.0e-34 147.5 93 82.8
CsaV3_5G002240 Cucumis sativus L. HOM05D001461 ORTHO05D002801 1.6e-32 142.5 92 78.3
MELO3C005731.2 Cucumis melo HOM05D001461 ORTHO05D002801 2.6e-30 135.2 86 77.9
CiPaw.11G126200 Carya illinoinensis HOM05D001461 ORTHO05D002801 4.8e-21 104.4 91 58.2
QL02p032149 Quercus lobata HOM05D001461 ORTHO05D002801 3.1e-20 101.7 91 56.0
QL10p040340 Quercus lobata HOM05D001461 ORTHO05D002801 3.1e-20 101.7 91 56.0
Gohir.A08G091500 Gossypium hirsutum HOM05D001461 ORTHO05D002801 5.4e-20 100.9 91 53.8
Haze_08704 Corylus avellana HOM05D001461 ORTHO05D002801 2.0e-19 99.0 93 58.1
Cfa012280 Carpinus fangiana HOM05D001461 ORTHO05D002801 5.9e-19 97.4 93 58.1
CiPaw.12G086800 Carya illinoinensis HOM05D001461 ORTHO05D002801 1.0e-18 96.7 90 56.7
Gorai.004G136500 Gossypium raimondii HOM05D001461 ORTHO05D002801 1.0e-18 96.7 91 53.8
Eucgr.D01786 Eucalyptus grandis HOM05D001461 ORTHO05D002801 1.3e-18 96.3 88 54.5
Gohir.D08G133400 Gossypium hirsutum HOM05D001461 ORTHO05D002801 1.7e-18 95.9 91 53.8
Duzib068G0549 Durio zibethinus HOM05D001461 ORTHO05D002801 8.5e-18 93.6 91 52.7
Dinv37564 Davidia involucrata HOM05D001461 ORTHO05D002801 1.5e-17 92.8 93 52.7
Thecc.03G290400 Theobroma cacao HOM05D001461 ORTHO05D002801 5.5e-17 90.9 91 52.7
Glyma.11G019800 Glycine max HOM05D001461 ORTHO05D002801 9.5e-17 90.1 93 52.7
Duzib205G0346 Durio zibethinus HOM05D001461 ORTHO05D002801 1.2e-16 89.7 91 52.7
Dinv38880 Davidia involucrata HOM05D001461 ORTHO05D002801 1.6e-16 89.4 89 49.4
MD06G1098100 Malus domestica HOM05D001461 ORTHO05D002801 2.1e-16 89.0 92 53.3
Cpa.g.sc122.17 Carica papaya HOM05D001461 ORTHO05D002801 2.8e-16 88.6 92 53.3
Glyma.01G223700 Glycine max HOM05D001461 ORTHO05D002801 3.6e-16 88.2 92 53.3
Lalb_Chr05g0211671 Lupinus albus HOM05D001461 ORTHO05D002801 3.6e-16 88.2 91 50.5
VMungo1215G2718 Vigna mungo HOM05D001461 ORTHO05D002801 3.6e-16 88.2 92 53.3
TPR.G6700 Trifolium pratense HOM05D001461 ORTHO05D002801 8.0e-16 87.0 92 54.3
Ca_24528_v3 Cicer arietinum L. HOM05D001461 ORTHO05D002801 1.0e-15 86.7 92 53.3
RcHm_v2.0_Chr7g0195911 Rosa chinensis HOM05D001461 ORTHO05D002801 1.4e-15 86.3 92 53.3
CANSAT21G2284 Cannabis sativa HOM05D001461 ORTHO05D002801 1.8e-15 85.9 98 51.0
Phvul.002G161700 Phaseolus vulgaris HOM05D001461 ORTHO05D002801 1.8e-15 85.9 91 49.5
COL.COLO4_21751 Corchorus olitorius HOM05D001461 ORTHO05D002801 3.0e-15 85.1 93 52.7
FvH4_5g03740 Fragaria vesca HOM05D001461 ORTHO05D002801 4.0e-15 84.7 92 53.3
FAN13G0326 Fragaria x ananassa HOM05D001461 ORTHO05D002801 4.0e-15 84.7 92 53.3
FAN13G0022 Fragaria x ananassa HOM05D001461 ORTHO05D002801 5.2e-15 84.3 92 53.3
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 1.5e-14 82.8 92 52.2
vmacro11422 Vaccinium macrocarpon HOM05D001461 ORTHO05D002801 2.0e-14 82.4 88 48.9
TAR636G2610 Trochodendron aralioides HOM05D001461 ORTHO05D002801 3.4e-14 81.6 91 49.5
Actinidia04222 Actinidia chinensis HOM05D001461 ORTHO05D002801 4.4e-14 81.3 88 47.7
Rhsim02G0238800 Rhododendron simsii HOM05D001461 ORTHO05D002801 5.7e-14 80.9 89 46.1
Duzib084G1414 Durio zibethinus HOM05D001461 ORTHO05D002801 7.5e-14 80.5 91 48.4
FAN08G1711 Fragaria x ananassa HOM05D001461 ORTHO05D002801 7.5e-14 80.5 92 53.3
Gohir.A12G232520 Gossypium hirsutum HOM05D001461 ORTHO05D002801 7.5e-14 80.5 91 47.3
Gorai.008G251400 Gossypium raimondii HOM05D001461 ORTHO05D002801 7.5e-14 80.5 91 47.3
Gohir.D12G235200 Gossypium hirsutum HOM05D001461 ORTHO05D002801 2.2e-13 79.0 91 46.2
TAR629G2645 Trochodendron aralioides HOM05D001461 ORTHO05D002801 2.2e-13 79.0 91 45.1
Cc08_g15570 Coffea canephora HOM05D001461 ORTHO05D002801 2.8e-13 78.6 89 46.1
Manes.02G014200 Manihot esculenta HOM05D001461 ORTHO05D002801 2.8e-13 78.6 91 47.3
TWI15G0184 Tripterygium wilfordii HOM05D001461 ORTHO05D002801 3.7e-13 78.2 91 50.5
Psat2g184280 Pisum sativum HOM05D001461 ORTHO05D002801 4.9e-13 77.8 94 51.1
TWI81G1025 Tripterygium wilfordii HOM05D001461 ORTHO05D002801 4.9e-13 77.8 91 49.5
Atru.chr9.2073 Acer truncatum HOM05D001461 ORTHO05D002801 1.1e-12 76.6 90 47.8
Ciclev10019168m.g Citrus clementina HOM05D001461 ORTHO05D002801 1.1e-12 76.6 91 45.1
Potri.001G096200 Populus trichocarpa HOM05D001461 ORTHO05D002801 1.4e-12 76.3 91 48.4
LjContig00312_ERROPOS870357g0013551 Lotus japonicus HOM05D001461 ORTHO05D002801 1.8e-12 75.9 94 50.0
Prupe.5G111800 Prunus persica HOM05D001461 ORTHO05D002801 1.8e-12 75.9 91 46.2
Thecc.01G349200 Theobroma cacao HOM05D001461 ORTHO05D002801 1.8e-12 75.9 91 45.1
Sabra01G0072200 Salix brachista HOM05D001461 ORTHO05D002801 2.4e-12 75.5 93 49.5
MSTRG.11943 Avicennia marina HOM05D001461 ORTHO05D002801 3.1e-12 75.1 89 46.1
Medtr5g009750 Medicago truncatula HOM05D001461 ORTHO05D002801 3.1e-12 75.1 94 48.9
COL.COLO4_06355 Corchorus olitorius HOM05D001461 ORTHO05D002801 9.2e-12 73.6 91 42.9
Sabra03G0097200 Salix brachista HOM05D001461 ORTHO05D002801 1.2e-11 73.2 91 47.3
Duzib133G1464 Durio zibethinus HOM05D001461 ORTHO05D002801 2.7e-11 72.0 91 42.9
arahy.Tifrunner.gnm1.ann1.2M8W8F Arachis hypogaea HOM05D001461 ORTHO05D002801 4.5e-11 71.2 91 49.5
arahy.Tifrunner.gnm1.ann1.CSBF71 Arachis hypogaea HOM05D001461 ORTHO05D002801 4.5e-11 71.2 91 49.5
DCAR_027744 Daucus carota HOM05D001461 ORTHO05D002801 5.9e-11 70.9 88 43.2
Nn7g37348 Nelumbo nucifera HOM05D001461 ORTHO05D002801 7.8e-11 70.5 91 46.2
Nitab4.5_0002564g0050 Nicotiana tabacum HOM05D001461 ORTHO05D002801 7.8e-11 70.5 89 44.9
Nitab4.5_0000223g0010 Nicotiana tabacum HOM05D001461 ORTHO05D002801 1.0e-10 70.1 89 47.2
Duzib138G1087 Durio zibethinus HOM05D001461 ORTHO05D002801 2.3e-10 68.9 82 43.9
Sopen08g030120 Solanum pennellii HOM05D001461 ORTHO05D002801 2.3e-10 68.9 89 44.9
Manes.05G027301 Manihot esculenta HOM05D001461 ORTHO05D002801 5.0e-10 67.8 93 40.9
Cfa003847 Carpinus fangiana HOM05D001461 ORTHO05D002801 6.6e-10 67.4 91 42.9
Gohir.D11G098500 Gossypium hirsutum HOM05D001461 ORTHO05D002801 6.6e-10 67.4 91 41.8
Gohir.A11G093500 Gossypium hirsutum HOM05D001461 ORTHO05D002801 8.6e-10 67.0 91 41.8
Gorai.007G104700 Gossypium raimondii HOM05D001461 ORTHO05D002801 8.6e-10 67.0 91 41.8
Peaxi162Scf00074g01418 Petunia axillaris HOM05D001461 ORTHO05D002801 8.6e-10 67.0 89 43.8
Solyc08g081830.3 Solanum lycopersicum HOM05D001461 ORTHO05D002801 8.6e-10 67.0 89 43.8
CAN.G532.61 Capsicum annuum HOM05D001461 ORTHO05D002801 1.5e-09 66.2 89 43.8
PGSC0003DMG400012313 Solanum tuberosum HOM05D001461 ORTHO05D002801 1.5e-09 66.2 89 44.9
Manes.01G250400 Manihot esculenta HOM05D001461 ORTHO05D002801 2.5e-09 65.5 91 40.7
PSO170G4506 Papaver somniferum HOM05D001461 ORTHO05D002801 3.3e-09 65.1 88 40.9
Potri.014G093400 Populus trichocarpa HOM05D001461 ORTHO05D002801 4.3e-09 64.7 91 38.5
MBI06_g04296_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D002801 1.6e-08 62.8 109 34.9
Sabra14G0067800 Salix brachista HOM05D001461 ORTHO05D002801 1.6e-08 62.8 91 37.4
Haze_15603 Corylus avellana HOM05D001461 ORTHO05D002801 2.8e-08 62.0 91 40.7
Dinv32541 Davidia involucrata HOM05D001461 ORTHO05D002801 2.8e-08 62.0 91 42.9
Oeu008835.1 Olea europaea HOM05D001461 ORTHO05D002801 3.6e-08 61.6 56 55.4
MBI07_g06329_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D002801 4.7e-08 61.2 105 37.1
TWI59G0643 Tripterygium wilfordii HOM05D001461 ORTHO05D002801 4.7e-08 61.2 83 42.2
Glyma.16G029900 Glycine max HOM05D001461 ORTHO05D002801 6.1e-08 60.8 87 37.9
Glyma.07G061300 Glycine max HOM05D001461 ORTHO05D002801 1.4e-07 59.7 89 36.0
Oeu063050.1 Olea europaea HOM05D001461 ORTHO05D002801 1.4e-07 59.7 59 50.8
Actinidia10092 Actinidia chinensis HOM05D001461 ORTHO05D002801 3.0e-07 58.5 86 41.9
Cpa.g.sc184.5 Carica papaya HOM05D001461 ORTHO05D002801 3.0e-07 58.5 82 39.0
Migut.A00692 Erythranthe guttata HOM05D001461 ORTHO05D002801 3.0e-07 58.5 91 42.9
Lj2C174T8 Lonicera japonica HOM05D001461 ORTHO05D002801 3.0e-07 58.5 89 41.6
PSO135G0588 Papaver somniferum HOM05D001461 ORTHO05D002801 3.0e-07 58.5 89 41.6
Potri.002G166600 Populus trichocarpa HOM05D001461 ORTHO05D002801 3.0e-07 58.5 90 36.7
PSO384G2039 Papaver somniferum HOM05D001461 ORTHO05D002801 6.8e-07 57.4 93 41.9
Lj3g0014894 Lotus japonicus HOM05D001461 ORTHO05D002801 8.9e-07 57.0 89 36.0
SalBow1G7989 Salvia bowleyana HOM05D001461 ORTHO05D002801 8.9e-07 57.0 93 41.9
Sc01g0010010 Simmondsia chinensis HOM05D001461 ORTHO05D002801 8.9e-07 57.0 86 36.0
CiPaw.01G070400 Carya illinoinensis HOM05D001461 ORTHO05D002801 1.2e-06 56.6 78 39.7
Actinidia20184 Actinidia chinensis HOM05D001461 ORTHO05D002801 1.5e-06 56.2 90 41.1
Ciclev10019237m.g Citrus clementina HOM05D001461 ORTHO05D002801 1.5e-06 56.2 85 38.8
MSTRG.25649 Avicennia marina HOM05D001461 ORTHO05D002801 3.4e-06 55.1 89 38.2
QL04p057867 Quercus lobata HOM05D001461 ORTHO05D002801 3.4e-06 55.1 91 37.4
Sabra02G0145000 Salix brachista HOM05D001461 ORTHO05D002801 3.4e-06 55.1 91 36.3
PGR031G2389 Punica granatum HOM05D001461 ORTHO05D002801 4.4e-06 54.7 91 40.7
vmacro13210 Vaccinium macrocarpon HOM05D001461 ORTHO05D002801 5.7e-06 54.3 88 42.0
Dinv43885 Davidia involucrata HOM05D001461 ORTHO05D002801 9.8e-06 53.5 91 40.7
MD01G1074000 Malus domestica HOM05D001461 ORTHO05D002801 9.8e-06 53.5 73 41.1
TPR.G4762 Trifolium pratense HOM05D001461 ORTHO05D002801 9.8e-06 53.5 91 38.5


User provided reference genes

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