Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 1.7e-149 532.7 278 100.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 3.4e-86 322.4 259 67.6
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 5.6e-81 305.1 260 66.9
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 8.4e-77 291.2 261 65.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 2.0e-38 163.7 275 46.5
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 7.2e-36 155.2 270 42.6
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.7e-35 153.3 266 42.5
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 3.0e-34 149.8 274 43.1
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 5.2e-34 149.1 253 44.7
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 1.2e-33 147.9 145 61.4
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 7.5e-33 145.2 260 41.2
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.2e-32 143.7 263 40.7
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.8e-32 143.3 263 40.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.8e-32 143.3 254 42.1
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.3e-32 142.1 263 41.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.4e-31 141.0 252 40.5
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.8e-31 140.6 95 72.6
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.1e-31 139.8 256 41.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 4.1e-31 139.4 117 63.2
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 4.1e-31 139.4 253 40.7
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 4.1e-31 139.4 257 42.0
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 4.1e-31 139.4 245 46.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 5.4e-31 139.0 123 63.4
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 7.0e-31 138.7 269 39.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.2e-30 137.9 209 45.9
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.6e-30 137.5 211 44.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.6e-30 137.5 149 51.0
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.6e-30 137.5 200 45.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 2.0e-30 137.1 207 43.5
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.9e-30 135.6 260 40.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 7.7e-30 135.2 269 38.3
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.7e-29 134.0 95 71.6
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.3e-29 133.7 230 41.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.3e-29 133.7 120 59.2
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 2.9e-29 133.3 216 41.7
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 3.8e-29 132.9 199 43.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.0e-29 132.5 161 53.4
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 5.0e-29 132.5 205 44.9
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 6.6e-29 132.1 150 52.7
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 8.6e-29 131.7 104 64.4
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 8.6e-29 131.7 158 50.0
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-28 131.3 186 46.8
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.1e-28 131.3 200 43.5
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.5e-28 131.0 101 63.4
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.9e-28 130.6 156 48.7
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.9e-28 130.6 151 53.6
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.9e-28 130.6 137 56.9
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.9e-28 130.6 99 64.6
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.5e-28 130.2 118 56.8
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.3e-28 129.8 151 53.6
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 5.5e-28 129.0 94 69.1
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.5e-28 129.0 128 57.8
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-27 127.9 117 59.0
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-27 127.1 158 52.5
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-27 127.1 114 61.4
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 2.1e-27 127.1 158 53.8
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-27 126.7 259 38.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 2.8e-27 126.7 241 41.1
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 3.6e-27 126.3 99 62.6
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 3.6e-27 126.3 99 62.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 6.1e-27 125.6 147 53.1
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 8.0e-27 125.2 117 55.6
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.4e-26 124.4 137 51.8
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.8e-26 124.0 125 55.2
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 4.0e-26 122.9 166 47.6
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.8e-26 122.1 84 73.8
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 6.8e-26 122.1 144 49.3
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 8.9e-26 121.7 104 59.6
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 8.9e-26 121.7 114 57.9
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.5e-25 120.9 89 66.3
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.5e-25 120.9 263 34.6
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.5e-25 120.9 95 65.3
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 2.0e-25 120.6 158 48.7
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 2.6e-25 120.2 152 50.0
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.6e-25 120.2 134 51.5
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 5.7e-25 119.0 84 70.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 5.7e-25 119.0 83 72.3
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 7.5e-25 118.6 135 51.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.3e-24 117.9 132 52.3
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.7e-24 117.5 115 59.1
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.8e-24 116.7 148 48.0
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.8e-24 116.7 148 48.0
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 3.7e-24 116.3 123 53.7
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 3.7e-24 116.3 139 51.1
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 6.3e-24 115.5 94 63.8
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 6.3e-24 115.5 154 44.8
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 8.3e-24 115.2 121 52.1
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.1e-23 114.8 248 35.1
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.1e-23 114.8 111 53.2
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.4e-23 114.4 111 54.1
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.8e-23 114.0 248 35.1
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.8e-23 114.0 248 35.1
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.4e-23 113.6 156 43.6
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 3.2e-23 113.2 151 47.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.2e-23 113.2 111 53.2
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 3.2e-23 113.2 87 64.4
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 5.4e-23 112.5 111 53.2
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 9.2e-23 111.7 84 66.7
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 9.2e-23 111.7 251 34.3
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.2e-22 111.3 201 41.8
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.6e-22 110.9 104 56.7
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 3.5e-22 109.8 137 48.9
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.5e-22 109.8 88 56.8
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 4.5e-22 109.4 97 60.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.0e-21 108.2 200 42.5
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.0e-18 98.2 113 48.7
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 2.4e-15 87.0 146 39.0
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 9.2e-15 85.1 85 50.6
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.6e-14 84.3 52 78.8
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.1e-12 78.2 63 52.4
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 4.0e-10 69.7 78 42.3
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.5e-09 67.8 47 72.3
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-06 57.4 106 42.5


User provided reference genes

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