Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 3.1e-72 275.0 136 100.0
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 2.7e-52 208.8 147 73.5
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 5.1e-51 204.5 147 72.1
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 5.6e-50 201.1 149 70.5
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 5.6e-42 174.5 149 62.4
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 4.8e-41 171.4 151 60.3
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 2.4e-40 169.1 144 62.5
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 9.0e-40 167.2 146 61.0
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 9.0e-40 167.2 146 63.7
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 1.2e-39 166.8 145 62.1
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 4.5e-39 164.9 142 62.7
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 5.8e-39 164.5 108 69.4
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 7.6e-39 164.1 110 71.8
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 1.3e-38 163.3 150 59.3
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 1.7e-38 162.9 149 59.7
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 2.2e-38 162.5 148 59.5
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 3.2e-37 158.7 144 59.0
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 4.2e-37 158.3 148 60.1
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 9.3e-37 157.1 151 57.0
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 2.1e-36 156.0 147 55.8
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 3.5e-36 155.2 155 56.8
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 3.5e-36 155.2 109 67.9
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 4.6e-36 154.8 151 55.6
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 4.6e-36 154.8 151 51.7
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 6.0e-36 154.5 152 55.9
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 6.0e-36 154.5 146 58.9
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.9e-36 154.1 114 62.3
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.9e-36 154.1 151 51.0
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 7.9e-36 154.1 151 57.0
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.0e-35 153.7 151 51.0
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 1.0e-35 153.7 149 57.0
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.3e-35 153.3 151 50.3
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 2.3e-35 152.5 152 56.6
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 3.0e-35 152.1 152 53.9
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 5.1e-35 151.4 153 53.6
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 6.7e-35 151.0 143 57.3
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 1.1e-34 150.2 152 55.3
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.5e-34 149.8 143 57.3
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.5e-34 149.8 143 57.3
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 1.3e-33 146.7 147 53.7
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 8.2e-33 144.1 152 53.3
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 1.4e-32 143.3 156 51.9
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.4e-32 143.3 150 53.3
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 1.8e-32 142.9 153 51.6
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 3.1e-32 142.1 159 52.8
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 3.1e-32 142.1 145 55.2
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 4.0e-32 141.7 145 51.7
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.2e-31 140.2 150 52.7
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 1.7e-30 136.3 145 53.8
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.4e-29 133.3 121 57.0
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 1.9e-29 132.9 146 52.7
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.2e-29 132.1 119 58.8
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 4.2e-29 131.7 99 65.7
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 7.1e-29 131.0 131 54.2
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 7.1e-29 131.0 145 51.7
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 9.3e-29 130.6 147 47.6
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.6e-28 129.8 106 61.3
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 2.1e-28 129.4 158 48.7
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 4.6e-28 128.3 148 50.7
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 8.7e-27 124.0 145 46.2
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 2.5e-26 122.5 130 53.1
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 2.5e-26 122.5 152 46.1
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 4.3e-26 121.7 115 56.5
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 5.7e-26 121.3 104 59.6
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 5.7e-26 121.3 145 47.6
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 2.2e-25 119.4 114 53.5
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 2.8e-25 119.0 117 51.3
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.8e-25 119.0 122 52.5
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 4.8e-25 118.2 147 50.3
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 6.3e-25 117.9 120 55.0
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 8.2e-25 117.5 142 47.2
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 8.2e-25 117.5 143 47.6
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 1.1e-24 117.1 142 45.8
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 1.8e-24 116.3 147 42.9
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 2.4e-24 115.9 142 47.2
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 2.4e-24 115.9 143 46.9
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 2.4e-24 115.9 144 46.5
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 6.9e-24 114.4 143 46.9
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 6.9e-24 114.4 132 47.7
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 9.0e-24 114.0 143 46.9
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 1.2e-23 113.6 139 47.5
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 1.2e-23 113.6 120 53.3
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.5e-23 113.2 113 50.4
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 2.0e-23 112.8 146 47.9
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 2.0e-23 112.8 86 67.4
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 4.5e-23 111.7 141 48.2
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 4.5e-23 111.7 142 45.1
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 5.9e-23 111.3 139 50.4
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 5.9e-23 111.3 152 47.4
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.0e-22 110.5 104 50.0
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.3e-22 110.2 117 52.1
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 2.9e-22 109.0 139 48.9
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 8.5e-22 107.5 138 48.6
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.1e-21 107.1 155 43.2
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.1e-21 107.1 155 43.2
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 1.4e-21 106.7 145 44.1
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 1.9e-21 106.3 146 43.8
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 1.9e-21 106.3 144 45.1
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 2.5e-21 105.9 142 47.2
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 5.5e-21 104.8 149 43.0
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 1.2e-20 103.6 143 43.4
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 1.2e-20 103.6 143 43.4
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 6.1e-20 101.3 134 46.3
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 6.1e-20 101.3 116 48.3
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.4e-19 100.1 124 46.0
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 3.9e-19 98.6 126 48.4
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 5.1e-19 98.2 89 60.7
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 6.7e-19 97.8 132 43.9
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 6.3e-17 91.3 120 50.0
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 1.1e-16 90.5 138 44.2
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 5.3e-16 88.2 134 44.8
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.6e-12 76.6 134 38.1
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.4e-11 73.6 84 48.8
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.4e-11 73.6 84 48.8
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.3e-11 72.8 76 51.3
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 3.9e-11 72.0 100 46.0
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 5.1e-11 71.6 100 46.0
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 1.5e-10 70.1 100 45.0
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 1.5e-10 70.1 100 45.0
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 2.0e-10 69.7 45 64.4
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 2.0e-10 69.7 70 45.7
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 2.8e-09 65.9 85 43.5
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 6.3e-09 64.7 115 40.9
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.8e-08 63.2 100 42.0
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 4.5e-07 58.5 92 44.6
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 5.9e-07 58.2 55 50.9


User provided reference genes

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