Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027823 Sechium edule HOM05D000494 ORTHO05D048831 3.3e-65 251.5 124 100.0
ClCG11G018860 Citrullus lanatus HOM05D000494 ORTHO05D000556 1.6e-27 126.3 133 54.1
Sed0013532 Sechium edule HOM05D000494 ORTHO05D000556 1.0e-26 123.6 133 53.4
MELO3C017042.2 Cucumis melo HOM05D000494 ORTHO05D000556 1.3e-24 116.7 133 49.6
CsaV3_4G037450 Cucumis sativus L. HOM05D000494 ORTHO05D000556 1.7e-24 116.3 133 49.6
Cfa014116 Carpinus fangiana HOM05D000494 ORTHO05D000556 1.5e-17 93.2 135 42.2
Haze_22834 Corylus avellana HOM05D000494 ORTHO05D000556 4.4e-17 91.7 134 41.8
CiPaw.07G135800 Carya illinoinensis HOM05D000494 ORTHO05D000556 1.3e-16 90.1 135 40.7
QL02p015172 Quercus lobata HOM05D000494 ORTHO05D000556 3.7e-16 88.6 135 40.0
TWI12G0038 Tripterygium wilfordii HOM05D000494 ORTHO05D000556 1.0e-13 80.5 135 37.0
Dinv31969 Davidia involucrata HOM05D000494 ORTHO05D000556 2.9e-13 79.0 134 38.1
Atru.chr13.100 Acer truncatum HOM05D000494 ORTHO05D000556 3.8e-13 78.6 135 37.0
Thecc.08G062800 Theobroma cacao HOM05D000494 ORTHO05D000556 5.0e-13 78.2 135 36.3
Duzib093G0246 Durio zibethinus HOM05D000494 ORTHO05D000556 5.5e-12 74.7 135 36.3
Nn5g31008 Nelumbo nucifera HOM05D000494 ORTHO05D000556 7.2e-12 74.3 133 37.6
TAR434G0001 Trochodendron aralioides HOM05D000494 ORTHO05D000556 9.4e-12 73.9 135 37.0
TAR628G0166 Trochodendron aralioides HOM05D000494 ORTHO05D000556 9.4e-12 73.9 135 37.0
Duzib116G0683 Durio zibethinus HOM05D000494 ORTHO05D000556 4.7e-11 71.6 134 35.8
MBI08_g37959_MAGBIO Magnolia biondii HOM05D000494 ORTHO05D000556 8.0e-11 70.9 134 32.8
Rhsim07G0256900 Rhododendron simsii HOM05D000494 ORTHO05D000556 8.0e-11 70.9 133 34.6
Gorai.002G114300 Gossypium raimondii HOM05D000494 ORTHO05D000556 1.4e-10 70.1 135 37.0
TAR633G1800 Trochodendron aralioides HOM05D000494 ORTHO05D000556 1.4e-10 70.1 134 35.1
Manes.13G068901 Manihot esculenta HOM05D000494 ORTHO05D000556 1.8e-10 69.7 135 33.3
TAR625G1495 Trochodendron aralioides HOM05D000494 ORTHO05D000556 1.8e-10 69.7 132 35.6
Gohir.A01G103300 Gossypium hirsutum HOM05D000494 ORTHO05D000556 3.0e-10 68.9 135 36.3
Manes.18G003500 Manihot esculenta HOM05D000494 ORTHO05D000556 5.2e-10 68.2 133 33.8
THA.LOC104801946 Tarenaya hassleriana HOM05D000494 ORTHO05D000556 5.2e-10 68.2 135 34.8
vmacro04417 Vaccinium macrocarpon HOM05D000494 ORTHO05D000556 5.2e-10 68.2 133 35.3
Haze_01999 Corylus avellana HOM05D000494 ORTHO05D000556 6.8e-10 67.8 134 32.1
Gohir.D02G101200 Gossypium hirsutum HOM05D000494 ORTHO05D000556 6.8e-10 67.8 135 33.3
Prupe.8G180100 Prunus persica HOM05D000494 ORTHO05D000556 6.8e-10 67.8 134 33.6
RcHm_v2.0_Chr7g0215951 Rosa chinensis HOM05D000494 ORTHO05D000556 8.8e-10 67.4 133 35.3
Sabra05G0196800 Salix brachista HOM05D000494 ORTHO05D000556 1.2e-09 67.0 140 34.3
Gorai.005G114600 Gossypium raimondii HOM05D000494 ORTHO05D000556 1.5e-09 66.6 135 33.3
Gohir.A02G085500 Gossypium hirsutum HOM05D000494 ORTHO05D000556 2.6e-09 65.9 135 33.3
Nn6g31678 Nelumbo nucifera HOM05D000494 ORTHO05D000556 2.6e-09 65.9 133 33.8
Potri.005G253700 Populus trichocarpa HOM05D000494 ORTHO05D000556 3.4e-09 65.5 140 33.6
MD06G1006700 Malus domestica HOM05D000494 ORTHO05D000556 4.4e-09 65.1 133 34.6
ATR0807G149 Amborella trichopoda HOM05D000494 ORTHO05D000556 1.3e-08 63.5 135 31.1
MD10G1141800 Malus domestica HOM05D000494 ORTHO05D000556 1.3e-08 63.5 134 31.3
RcHm_v2.0_Chr6g0280911 Rosa chinensis HOM05D000494 ORTHO05D000556 1.7e-08 63.2 134 32.8
MBI05_g28695_MAGBIO Magnolia biondii HOM05D000494 ORTHO05D000556 2.2e-08 62.8 134 32.1
Nitab4.5_0004356g0010 Nicotiana tabacum HOM05D000494 ORTHO05D000556 2.2e-08 62.8 135 34.8
MD05G1139300 Malus domestica HOM05D000494 ORTHO05D000556 2.8e-08 62.4 134 29.9
Ciclev10001476m.g Citrus clementina HOM05D000494 ORTHO05D000556 3.7e-08 62.0 136 33.8
Nitab4.5_0000486g0180 Nicotiana tabacum HOM05D000494 ORTHO05D000556 3.7e-08 62.0 135 35.6
Rhsim08G0026900 Rhododendron simsii HOM05D000494 ORTHO05D000556 6.3e-08 61.2 134 29.9
Actinidia28611 Actinidia chinensis HOM05D000494 ORTHO05D000556 1.1e-07 60.5 133 33.1
FAN04G1233 Fragaria x ananassa HOM05D000494 ORTHO05D000556 1.1e-07 60.5 142 35.2
Actinidia37912 Actinidia chinensis HOM05D000557 ORTHO05D000556 1.4e-07 60.1 58 50.0
TPR.G38143 Trifolium pratense HOM05D000494 ORTHO05D000556 1.4e-07 60.1 140 30.0
Medtr3g115900 Medicago truncatula HOM05D000494 ORTHO05D048831 1.8e-07 59.7 62 50.0
Gohir.D01G088600 Gossypium hirsutum HOM05D000494 ORTHO05D000556 2.4e-07 59.3 100 39.0
Duzib041G0119 Durio zibethinus HOM05D000494 ORTHO05D000556 3.1e-07 58.9 98 36.7
COL.COLO4_37753 Corchorus olitorius HOM05D000494 ORTHO05D000556 4.1e-07 58.5 104 34.6
ECA233G6156 Erigeron canadensis HOM05D000494 ORTHO05D000556 4.1e-07 58.5 134 31.3
Lj4A809T56 Lonicera japonica HOM05D000494 ORTHO05D000556 4.1e-07 58.5 134 32.1
PGR083G0923 Punica granatum HOM05D000494 ORTHO05D000556 4.1e-07 58.5 134 33.6
Actinidia35687 Actinidia chinensis HOM05D000494 ORTHO05D000556 5.4e-07 58.2 109 33.9
PSO210G0068 Papaver somniferum HOM05D000494 ORTHO05D000556 5.4e-07 58.2 134 31.3
Peaxi162Scf01114g00013 Petunia axillaris HOM05D000494 ORTHO05D000556 5.4e-07 58.2 136 36.0
GSVIVG01013399001 Vitis vinifera HOM05D000494 ORTHO05D000556 7.0e-07 57.8 106 35.8
MSTRG.24919 Avicennia marina HOM05D000494 ORTHO05D000556 9.2e-07 57.4 137 32.8
EL10Ac1g01909 Beta vulgaris HOM05D000494 ORTHO05D000556 9.2e-07 57.4 133 31.6
BraA04t18095Z Brassica rapa HOM05D000494 ORTHO05D000556 9.2e-07 57.4 127 34.6
FvH4_5g25660 Fragaria vesca HOM05D000494 ORTHO05D000556 9.2e-07 57.4 133 34.6
Lsat_1_v5_gn_9_45761 Lactuca sativa HOM05D000494 ORTHO05D000556 1.2e-06 57.0 135 35.6
MSTRG.24504 Avicennia marina HOM05D000494 ORTHO05D000556 1.6e-06 56.6 71 42.3
VMungo1309G1168 Vigna mungo HOM05D000494 ORTHO05D000556 2.0e-06 56.2 135 29.6
Ah.00g001050 Amaranthus hybridus HOM05D000494 ORTHO05D000556 2.7e-06 55.8 135 31.9
FAN15G0774 Fragaria x ananassa HOM05D000494 ORTHO05D000556 2.7e-06 55.8 134 28.4
Glyma.04G016100 Glycine max HOM05D000494 ORTHO05D000556 3.5e-06 55.5 135 30.4
PSO170G6039 Papaver somniferum HOM05D000494 ORTHO05D000556 3.5e-06 55.5 134 30.6
BcaB02g10583 Brassica carinata HOM05D000494 ORTHO05D000556 4.5e-06 55.1 126 34.9
HanXRQChr05g0144811 Helianthus annuus HOM05D000494 ORTHO05D000556 4.5e-06 55.1 131 31.3
SGA_v2.0_scaffold54G19640 Striga asiatica HOM05D000494 ORTHO05D000556 4.5e-06 55.1 127 31.5
Aa31LG9G13600 Aethionema arabicum HOM05D000494 ORTHO05D000556 7.7e-06 54.3 123 30.1


User provided reference genes

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