Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.1e-87 326.6 166 100.0
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 8.6e-69 263.8 168 79.8
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 8.1e-67 257.3 169 78.1
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 6.8e-66 254.2 167 77.8
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 7.8e-46 187.6 167 57.5
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 2.5e-44 182.6 163 56.4
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 9.6e-44 180.6 167 56.3
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 2.8e-43 179.1 158 58.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 2.8e-43 179.1 166 56.0
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 4.8e-43 178.3 166 55.4
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 8.1e-43 177.6 174 55.2
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.1e-42 177.2 165 57.0
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.4e-42 176.8 166 56.0
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.8e-42 176.4 166 56.6
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.1e-42 175.6 166 56.6
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.1e-42 175.6 167 53.9
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 4.0e-42 175.3 168 56.0
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.0e-42 175.3 167 53.3
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.0e-42 175.3 167 53.9
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.3e-40 170.2 175 51.4
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 2.9e-40 169.1 166 54.8
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.8e-40 168.7 172 51.7
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 6.4e-40 167.9 169 53.8
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.4e-39 166.0 167 55.7
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 3.2e-39 165.6 166 56.6
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.4e-39 164.9 175 50.9
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 8.7e-37 157.5 168 50.6
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-36 157.1 167 52.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.9e-36 156.4 164 51.8
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 3.3e-36 155.6 166 50.6
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 3.3e-36 155.6 169 55.0
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 6.2e-35 151.4 159 54.1
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.4e-34 150.2 174 51.1
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.4e-34 149.4 167 48.5
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 4.0e-34 148.7 163 50.3
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 5.3e-34 148.3 173 50.9
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 9.0e-34 147.5 172 49.4
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 3.4e-33 145.6 161 48.4
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 7.6e-33 144.4 167 49.7
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 3.8e-32 142.1 169 47.3
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 4.9e-32 141.7 169 45.6
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.5e-30 135.6 135 54.1
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 3.5e-30 135.6 167 47.3
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 4.6e-30 135.2 192 43.2
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.3e-29 133.7 133 55.6
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 3.9e-29 132.1 153 49.7
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 9.6e-28 127.5 129 55.0
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 9.6e-28 127.5 156 46.2
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 2.1e-27 126.3 120 57.5
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.0e-25 119.8 170 45.9
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 2.0e-25 119.8 161 45.3
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 1.3e-24 117.1 158 44.3
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 3.8e-24 115.5 157 43.9
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 8.4e-24 114.4 157 43.9
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.1e-23 114.0 160 43.8
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.4e-23 113.6 140 45.7
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 1.9e-23 113.2 140 46.4
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 3.2e-23 112.5 154 41.6
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.2e-23 112.5 131 48.1
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 3.2e-23 112.5 159 44.0
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 4.2e-23 112.1 186 41.4
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 7.1e-23 111.3 138 47.1
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.2e-22 110.5 159 42.1
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.7e-22 109.4 157 42.7
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.5e-22 109.0 143 42.7
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.3e-21 107.1 140 44.3
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 3.3e-20 102.4 169 42.6
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.2e-19 99.8 104 51.9
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 4.8e-19 98.6 139 46.8
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 4.8e-19 98.6 172 39.5
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.8e-18 96.7 140 45.7
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.4e-18 96.3 96 58.3
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 1.0e-16 90.9 107 51.4
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 1.3e-16 90.5 107 50.5
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.2e-16 89.7 112 45.5
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 4.2e-15 85.5 164 39.0
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.8e-13 80.1 110 45.5
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 2.3e-13 79.7 168 36.3
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.3e-11 73.9 120 38.3
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.0e-09 66.6 80 42.5


User provided reference genes

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