Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027769 Sechium edule HOM05D028453 ORTHO05D009079 3.2e-181 638.6 416 100.0
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 2.6e-66 256.9 208 79.3
Sed0008279 Sechium edule HOM05D028453 ORTHO05D009079 4.1e-51 206.5 413 52.8
Sed0004924 Sechium edule HOM05D013362 ORTHO05D013626 5.6e-16 89.7 329 26.4
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 1.2e-15 88.6 112 38.4
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.1e-15 87.8 112 36.6
Sed0014415 Sechium edule HOM05D013362 ORTHO05D013626 4.7e-15 86.7 95 42.1
Sed0002684 Sechium edule HOM05D013362 ORTHO05D013626 6.8e-14 82.8 283 26.1
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 2.6e-13 80.9 151 31.8
Sed0011016 Sechium edule HOM05D007907 ORTHO05D009079 1.4e-11 75.1 108 36.1
Sed0019183 Sechium edule HOM05D013362 ORTHO05D013626 2.4e-11 74.3 79 41.8
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.1e-10 71.2 85 36.5
ClCG02G010270 Citrullus lanatus HOM05D007907 ORTHO05D020468 4.6e-10 70.1 360 24.4
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.0e-10 69.7 88 34.1
Sed0009053 Sechium edule HOM05D015538 ORTHO05D013626 3.0e-09 67.4 73 49.3
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.6e-09 66.2 130 28.5
MELO3C032715.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.6e-09 65.9 94 30.9
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.1e-08 65.5 88 33.0
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.1e-08 65.5 90 34.4
Sed0001585 Sechium edule HOM05D024596 ORTHO05D373585 1.5e-08 65.1 42 92.9
Sed0023929 Sechium edule HOM05D007907 ORTHO05D009079 1.5e-08 65.1 97 36.1
MELO3C032179.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.5e-08 64.3 84 33.3
Sed0025466 Sechium edule HOM05D007907 ORTHO05D009079 2.5e-08 64.3 92 34.8
MELO3C033964.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.3e-08 63.9 81 34.6
MELO3C028439.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.2e-07 62.0 107 30.8
Sed0015265 Sechium edule HOM05D008761 ORTHO05D009079 1.6e-07 61.6 119 31.9
MELO3C028809.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.8e-07 60.8 80 35.0
Sed0022276 Sechium edule HOM05D028453 ORTHO05D373460 2.8e-07 60.8 44 86.4
MELO3C027609.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.6e-07 60.5 107 29.9
MELO3C030511.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.6e-07 60.5 136 29.4
Sed0001940 Sechium edule HOM05D028453 ORTHO05D373343 3.6e-07 60.5 41 87.8
CsaV3_3G032530 Cucumis sativus L. HOM05D008761 ORTHO05D009079 4.7e-07 60.1 121 29.8
MELO3C028249.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.1e-07 59.3 100 33.0
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 1.1e-06 58.9 83 34.9
CAN.G960.83 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-06 58.2 101 31.7
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 1.8e-06 58.2 106 32.1
MELO3C029203.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.4e-06 57.8 77 39.0
CsaV3_2G032890 Cucumis sativus L. HOM05D008761 ORTHO05D009079 2.4e-06 57.8 89 32.6
Sed0015983 Sechium edule HOM05D007907 ORTHO05D000482 2.4e-06 57.8 59 42.4
SGA_v2.0_scaffold273G46471 Striga asiatica HOM05D008585 ORTHO05D000397 2.4e-06 57.8 116 30.2
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 2.4e-06 57.8 158 25.3
MELO3C033168.2 Cucumis melo HOM05D026391 ORTHO05D009079 4.0e-06 57.0 97 30.9
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 5.2e-06 56.6 134 23.9
MELO3C027792.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.8e-06 56.2 95 31.6
MELO3C033891.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.9e-06 55.8 129 30.2
MELO3C034600.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.9e-06 55.8 107 28.0


User provided reference genes

Program Settings