Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 3.0e-88 328.6 172 100.0
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 3.6e-78 295.0 172 87.8
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 6.8e-77 290.8 172 86.6
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.4e-74 283.1 172 84.3
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.9e-74 282.7 172 84.9
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 5.4e-74 281.2 172 83.7
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.3e-72 276.6 172 82.6
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.3e-72 276.6 171 81.9
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 3.0e-72 275.4 172 82.0
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 6.6e-72 274.2 174 82.8
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 3.3e-71 271.9 174 81.0
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 9.5e-71 270.4 174 81.0
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 9.5e-71 270.4 174 81.0
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.6e-70 269.6 172 80.2
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 2.1e-70 269.2 172 79.7
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 4.7e-70 268.1 173 79.8
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 1.8e-69 266.2 172 79.7
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 1.8e-69 266.2 172 79.1
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 2.3e-69 265.8 172 79.7
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 2.3e-69 265.8 172 78.5
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 2.3e-69 265.8 173 79.8
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.3e-69 265.8 172 77.9
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 4.0e-69 265.0 172 77.9
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 8.9e-69 263.8 180 76.7
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 8.9e-69 263.8 172 78.5
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.2e-68 263.5 173 78.6
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 1.2e-68 263.5 172 79.1
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 1.2e-68 263.5 173 78.6
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.5e-68 263.1 172 77.3
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.4e-68 261.9 172 77.9
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.4e-68 261.9 172 77.9
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 9.9e-68 260.4 172 77.3
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 2.2e-67 259.2 172 76.2
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 3.8e-67 258.5 172 76.2
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 3.8e-67 258.5 173 77.5
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 3.8e-67 258.5 172 77.9
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.4e-66 256.5 181 75.1
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 1.9e-66 256.1 172 74.4
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 2.4e-66 255.8 176 76.7
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 9.2e-66 253.8 173 77.5
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.2e-65 253.4 172 74.4
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 1.2e-65 253.4 172 75.0
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 1.2e-65 253.4 171 77.2
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.6e-65 253.1 172 75.0
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.1e-65 252.7 172 75.0
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 2.7e-65 252.3 173 75.1
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 3.5e-65 251.9 173 76.9
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 7.8e-65 250.8 172 73.3
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.0e-64 250.4 172 73.8
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.3e-64 250.0 172 77.9
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 2.3e-64 249.2 172 75.0
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 3.0e-64 248.8 193 68.9
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 3.9e-64 248.4 168 73.8
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.1e-64 248.1 170 74.7
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 8.6e-64 247.3 173 73.4
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.1e-63 246.9 172 73.3
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.6e-62 243.0 172 72.7
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.6e-62 243.0 167 74.9
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 4.7e-62 241.5 144 84.7
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 4.7e-62 241.5 172 71.5
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.1e-61 240.4 172 73.8
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 4.0e-61 238.4 173 72.8
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 9.0e-61 237.3 172 69.8
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.2e-60 236.9 165 74.5
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 2.0e-60 236.1 173 71.7
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 2.6e-60 235.7 150 78.7
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 4.4e-60 235.0 173 71.7
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 4.4e-60 235.0 173 71.1
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 7.6e-60 234.2 173 70.5
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.3e-59 233.4 173 69.9
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 1.7e-59 233.0 173 71.7
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 2.9e-59 232.3 149 79.9
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 2.9e-59 232.3 144 81.2
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 3.8e-59 231.9 173 69.9
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.1e-58 230.3 173 71.7
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 1.4e-58 229.9 165 70.9
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.4e-58 229.2 165 70.9
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 7.1e-58 227.6 173 68.8
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 3.0e-56 222.2 146 76.7
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 3.9e-56 221.9 144 78.5
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 6.6e-56 221.1 144 80.6
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.1e-55 220.3 173 71.1
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.5e-55 219.9 142 78.9
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 1.9e-55 219.5 149 75.2
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 4.3e-55 218.4 143 78.3
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.8e-54 214.9 172 68.6
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 6.2e-54 214.5 150 72.7
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 6.9e-53 211.1 165 61.8
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 6.9e-53 211.1 150 72.7
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 2.0e-52 209.5 165 63.0
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 3.4e-52 208.8 144 72.9
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 2.9e-51 205.7 165 63.6
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 2.4e-50 202.6 165 60.6
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 2.5e-47 192.6 172 61.6
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.4e-45 186.8 172 61.6
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 2.9e-43 179.1 165 55.8
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.8e-40 169.9 120 72.5
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 6.7e-40 167.9 111 76.6
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 6.2e-38 161.4 144 61.8
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 2.4e-37 159.5 117 67.5
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 5.3e-37 158.3 116 75.0
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 9.0e-37 157.5 101 81.2
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 1.0e-35 154.1 123 65.9
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.9e-35 152.5 139 64.0
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.0e-32 144.1 99 78.8
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 2.4e-29 132.9 165 43.0
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 1.7e-27 126.7 99 68.7
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 5.0e-27 125.2 89 70.8
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 5.0e-27 125.2 128 56.2
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 5.0e-27 125.2 164 50.0
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 2.1e-25 119.8 143 51.7
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.0e-24 117.5 86 68.6
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.0e-24 117.5 104 62.5
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 1.0e-24 117.5 160 43.1
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 2.3e-24 116.3 95 66.3
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 3.0e-24 115.9 177 41.2
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 5.1e-24 115.2 86 68.6
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 4.5e-20 102.1 115 54.8
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 3.8e-19 99.0 86 64.0
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 5.0e-19 98.6 104 57.7
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.1e-15 87.4 71 63.4
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 1.4e-13 80.5 83 59.0
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 5.3e-13 78.6 63 69.8
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 7.7e-12 74.7 86 50.0
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 3.8e-11 72.4 57 61.4
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 6.5e-11 71.6 55 65.5
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.9e-10 70.1 58 60.3
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 7.2e-10 68.2 47 74.5
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 7.2e-10 68.2 58 58.6


User provided reference genes

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