Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 4.1e-275 951.0 586 100.0
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 2.0e-216 756.1 569 84.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 8.2e-215 750.7 569 84.5
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.7e-212 743.0 584 82.4
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 9.6e-123 444.9 581 58.3
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.6e-120 436.8 585 57.6
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 3.4e-120 436.4 572 57.7
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.0e-119 434.9 574 58.4
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 5.5e-118 429.1 577 57.9
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.6e-117 427.6 578 57.1
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.3e-116 424.5 578 56.2
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 6.7e-116 422.2 580 56.7
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 8.7e-116 421.8 461 52.3
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 4.3e-115 419.5 580 56.6
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 3.7e-114 416.4 565 56.5
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.4e-113 414.5 578 54.8
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.4e-110 404.4 579 56.1
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.9e-110 404.1 574 56.3
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 4.2e-110 402.9 462 49.6
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 2.1e-109 400.6 462 48.3
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 7.9e-109 398.7 463 48.8
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.3e-108 397.1 572 54.7
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.9e-107 394.0 577 53.6
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.2e-106 390.6 580 54.1
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 3.7e-106 389.8 573 55.5
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 4.1e-105 386.3 573 54.6
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.0e-104 384.0 572 54.5
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.8e-103 379.8 576 53.0
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.5e-102 377.1 573 51.3
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.2e-102 376.7 462 47.6
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 9.4e-102 375.2 577 52.5
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.2e-101 374.8 575 54.6
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.2e-101 374.8 547 56.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.2e-98 364.0 574 53.1
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 4.8e-98 362.8 575 53.7
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 6.9e-97 359.0 577 52.0
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.6e-96 357.1 576 53.1
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 4.5e-96 356.3 571 54.1
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 7.7e-96 355.5 467 46.9
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.3e-95 354.8 472 46.0
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 2.9e-95 353.6 469 46.7
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.4e-94 351.3 414 48.6
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.2e-94 349.7 572 50.7
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 2.1e-93 347.4 629 48.6
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.8e-92 344.4 459 44.7
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 2.3e-92 344.0 577 49.9
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 3.0e-92 343.6 460 45.9
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 8.8e-92 342.0 610 47.4
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 5.7e-91 339.3 577 49.9
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 3.1e-89 333.6 569 50.8
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.5e-86 324.7 460 42.8
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 2.5e-86 323.9 586 48.0
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 4.2e-86 323.2 572 48.6
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.2e-86 323.2 581 45.8
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 7.2e-86 322.4 480 40.2
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.6e-85 321.2 583 40.0
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 4.7e-85 319.7 580 48.3
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.3e-84 317.4 570 48.1
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 3.3e-83 313.5 569 48.3
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 5.7e-83 312.8 546 49.8
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.4e-81 307.4 464 39.2
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 5.0e-79 299.7 570 48.9
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 1.9e-78 297.7 565 48.8
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 3.2e-78 297.0 581 45.4
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 4.2e-78 296.6 579 49.2
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.6e-77 294.7 564 48.0
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 2.1e-77 294.3 572 46.9
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 3.0e-76 290.4 466 40.1
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 6.8e-76 289.3 572 49.3
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 8.8e-76 288.9 566 46.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 2.6e-75 287.3 564 46.8
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 3.4e-75 287.0 568 48.8
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.7e-74 283.5 566 48.4
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 4.8e-74 283.1 411 40.9
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 3.1e-73 280.4 564 48.8
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 5.4e-73 279.6 570 47.0
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.2e-72 278.5 566 48.6
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 2.7e-72 277.3 566 48.4
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-71 275.0 591 47.2
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 5.5e-70 269.6 566 46.1
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 7.2e-70 269.2 571 45.0
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 3.4e-67 260.4 575 44.7
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.8e-66 257.3 594 44.4
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 8.3e-66 255.8 568 42.6
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 2.7e-64 250.8 569 46.6
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 9.2e-57 225.7 338 45.0
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 2.3e-52 211.1 469 33.5
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.0e-51 208.0 454 50.9
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 7.0e-49 199.5 340 40.3
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 8.6e-47 192.6 453 30.7
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 9.9e-43 179.1 459 31.2
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.3e-42 178.7 577 32.6
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 8.3e-42 176.0 411 49.6
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 7.1e-41 172.9 461 31.7
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 9.5e-38 162.5 175 49.7
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 1.5e-35 155.2 571 36.6
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.9e-34 150.2 151 47.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.2e-26 124.8 295 34.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 2.4e-25 121.3 500 27.0
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.9e-22 111.7 222 39.6
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 9.6e-22 109.4 172 39.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 4.8e-21 107.1 160 42.5
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 2.2e-18 98.2 76 63.2
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.9e-18 97.8 154 46.8
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 6.2e-13 80.1 46 73.9
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 9.0e-12 76.3 81 49.4
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.5e-11 75.5 262 29.4
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 6.0e-08 63.5 62 51.6


User provided reference genes

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