Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 1.9e-104 382.5 194 100.0
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 7.9e-98 360.5 193 92.7
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 1.2e-93 346.7 192 90.6
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 1.4e-91 339.7 185 91.9
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 4.2e-83 311.6 191 79.6
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 2.0e-80 302.8 191 77.0
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 2.6e-80 302.4 192 76.6
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 3.3e-80 302.0 184 80.4
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 7.4e-80 300.8 192 76.6
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 1.7e-79 299.7 192 76.6
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 3.7e-79 298.5 189 76.7
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 1.1e-78 297.0 189 76.7
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.1e-78 297.0 189 79.4
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 1.4e-78 296.6 191 77.0
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 7.0e-78 294.3 191 76.4
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.5e-77 292.0 189 75.1
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 3.5e-77 292.0 189 76.2
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 3.5e-77 292.0 188 75.0
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 1.0e-76 290.4 192 74.0
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 1.0e-76 290.4 190 72.1
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.0e-76 290.4 188 73.9
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 2.9e-76 288.9 191 72.3
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 2.9e-76 288.9 191 71.7
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 3.8e-76 288.5 214 67.8
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 8.5e-76 287.3 189 73.5
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 8.5e-76 287.3 189 75.7
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.5e-75 286.6 191 73.3
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.5e-75 286.6 189 72.5
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.5e-75 285.8 191 72.8
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 3.2e-75 285.4 187 74.9
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 5.5e-75 284.6 191 73.8
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 7.2e-75 284.3 185 73.5
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 4.7e-74 281.6 186 73.1
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 6.1e-74 281.2 191 73.3
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 6.1e-74 281.2 188 70.2
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 8.0e-74 280.8 189 73.0
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.0e-73 280.4 189 75.1
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.0e-73 280.4 191 70.7
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 3.0e-73 278.9 233 61.8
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 5.2e-73 278.1 189 72.5
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 8.8e-73 277.3 191 69.6
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 1.1e-72 276.9 189 72.0
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.1e-72 276.9 190 68.9
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.0e-72 276.2 189 71.4
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 2.6e-72 275.8 189 74.6
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 3.3e-72 275.4 188 70.7
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 2.8e-71 272.3 189 68.3
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 2.8e-71 272.3 191 70.7
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 3.7e-71 271.9 175 77.7
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 8.2e-71 270.8 192 65.6
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 1.4e-70 270.0 189 67.2
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 2.4e-70 269.2 192 69.8
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 2.4e-70 269.2 186 71.0
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 7.0e-70 267.7 189 70.4
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 2.7e-69 265.8 185 68.1
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 5.9e-69 264.6 189 66.1
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.0e-68 263.8 188 66.0
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.3e-68 263.5 192 63.5
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 1.7e-68 263.1 177 72.3
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.7e-68 263.1 185 67.6
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 2.9e-68 262.3 186 69.9
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 1.9e-67 259.6 192 67.2
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 2.5e-67 259.2 188 65.4
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 4.7e-66 255.0 161 78.3
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 4.7e-66 255.0 161 78.3
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 6.1e-66 254.6 187 61.5
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 6.1e-66 254.6 167 73.7
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 2.3e-65 252.7 162 76.5
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.3e-65 252.7 229 59.4
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 3.4e-64 248.8 175 69.7
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 3.4e-64 248.8 154 77.3
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 1.3e-63 246.9 160 76.2
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 3.1e-62 242.3 186 62.9
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 7.7e-61 237.7 167 68.9
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.3e-60 236.9 170 68.2
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 2.9e-60 235.7 154 71.4
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 4.2e-59 231.9 197 62.4
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 2.6e-56 222.6 138 79.7
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 4.4e-56 221.9 138 79.7
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 6.4e-47 191.4 204 52.9
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 8.3e-47 191.0 153 65.4
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 4.6e-45 185.3 120 74.2
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 3.9e-44 182.2 124 70.2
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.1e-43 180.6 212 50.0
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.5e-43 180.3 109 79.8
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.2e-42 177.2 125 68.8
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.0e-36 157.5 103 71.8
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.2e-34 150.6 133 63.2
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.4e-30 136.3 133 54.9
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 1.6e-29 133.7 90 73.3
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 3.5e-29 132.5 78 82.1
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 6.6e-28 128.3 143 51.7
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 5.6e-27 125.2 70 85.7
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 1.1e-25 120.9 193 40.4
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 1.8e-25 120.2 78 70.5
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.9e-23 112.8 185 37.8
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 3.2e-22 109.4 74 71.6
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 3.2e-22 109.4 184 38.0
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.3e-20 103.2 185 36.2
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 3.9e-20 102.4 185 36.2
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 3.9e-20 102.4 130 36.9
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 1.9e-19 100.1 75 66.7
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 6.9e-17 91.7 140 44.3
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 6.9e-17 91.7 59 79.7
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 4.9e-15 85.5 159 38.4
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 1.1e-14 84.3 74 54.1
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 7.1e-14 81.6 56 66.1
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 2.8e-10 69.7 172 29.7
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 5.3e-09 65.5 59 50.8
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 2.9e-07 59.7 33 81.8
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 4.9e-07 58.9 61 47.5


User provided reference genes

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