Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.7e-106 389.4 205 100.0
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 2.0e-75 286.2 204 77.0
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 8.4e-74 280.8 209 77.0
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 7.4e-70 267.7 208 72.1
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 1.6e-69 266.5 206 72.3
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 9.3e-65 250.8 202 63.9
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 9.3e-65 250.8 202 71.8
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 9.3e-65 250.8 203 70.0
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 2.7e-64 249.2 202 70.3
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 6.0e-64 248.1 203 69.5
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 1.3e-63 246.9 203 67.0
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 1.8e-63 246.5 205 67.3
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 1.1e-62 243.8 215 66.0
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 1.5e-62 243.4 203 66.0
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 5.7e-62 241.5 206 66.5
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 7.4e-62 241.1 200 63.0
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 7.4e-62 241.1 197 64.5
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 1.3e-61 240.4 201 62.2
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.3e-61 240.4 205 69.3
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 1.3e-61 240.4 208 66.8
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 4.8e-61 238.4 210 62.9
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 4.8e-61 238.4 204 66.7
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 6.3e-61 238.0 205 66.8
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 6.3e-61 238.0 205 66.8
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 6.3e-61 238.0 199 63.8
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 6.3e-61 238.0 199 63.8
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 6.3e-61 238.0 202 68.8
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 8.2e-61 237.7 205 66.8
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 1.1e-60 237.3 203 61.6
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.4e-60 236.1 201 67.2
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 3.1e-60 235.7 201 66.7
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 3.1e-60 235.7 201 66.7
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 6.9e-60 234.6 210 61.9
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 5.9e-59 231.5 206 61.7
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.0e-58 230.7 196 64.3
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 1.3e-58 230.3 206 63.6
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.7e-58 229.9 206 61.2
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.7e-58 229.9 202 61.4
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 2.2e-58 229.6 200 59.5
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 5.0e-58 228.4 207 61.4
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.1e-57 227.3 200 63.5
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 3.2e-57 225.7 211 61.6
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 3.2e-57 225.7 201 62.2
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 6.1e-56 221.5 203 64.5
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 7.9e-56 221.1 206 65.0
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 7.9e-56 221.1 202 55.9
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 2.3e-55 219.5 204 61.8
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 3.0e-55 219.2 202 59.4
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 5.1e-55 218.4 201 55.7
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 6.7e-55 218.0 202 57.4
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 8.7e-55 217.6 199 58.3
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.5e-54 216.9 202 55.9
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 1.9e-54 216.5 214 62.1
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 3.3e-54 215.7 202 56.9
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 5.7e-54 214.9 205 59.0
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 5.7e-54 214.9 202 55.9
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 5.7e-54 214.9 214 62.6
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 7.4e-54 214.5 205 59.0
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 7.4e-54 214.5 204 56.4
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 7.4e-54 214.5 207 57.5
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 7.4e-54 214.5 204 59.8
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 2.8e-53 212.6 216 57.9
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 3.7e-53 212.2 199 63.3
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 4.8e-53 211.8 203 55.7
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 4.8e-53 211.8 204 55.4
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 6.3e-53 211.5 207 58.9
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 8.2e-53 211.1 203 57.1
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 8.2e-53 211.1 215 59.5
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 1.1e-52 210.7 209 59.8
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 1.8e-52 209.9 203 53.7
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 1.8e-52 209.9 201 61.2
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 3.1e-52 209.1 202 58.9
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 4.1e-52 208.8 203 57.1
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 4.1e-52 208.8 201 62.2
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 5.3e-52 208.4 202 54.5
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 5.3e-52 208.4 212 59.9
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 6.9e-52 208.0 202 55.9
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 9.1e-52 207.6 212 59.0
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 9.1e-52 207.6 204 58.3
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 9.1e-52 207.6 212 59.4
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 1.2e-51 207.2 202 55.4
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 1.2e-51 207.2 207 62.3
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 1.5e-51 206.8 200 58.0
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 2.0e-51 206.5 202 55.4
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 2.6e-51 206.1 203 57.1
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 3.4e-51 205.7 202 57.9
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 4.5e-51 205.3 213 57.7
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 1.3e-50 203.8 214 57.0
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 1.7e-50 203.4 200 58.0
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 2.9e-50 202.6 214 54.2
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 3.8e-50 202.2 202 57.4
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 3.8e-50 202.2 201 55.2
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 3.8e-50 202.2 201 55.2
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 3.8e-50 202.2 214 57.0
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 8.5e-50 201.1 207 58.5
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 2.5e-49 199.5 208 52.9
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 9.4e-49 197.6 208 51.9
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 2.1e-48 196.4 207 54.1
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 2.7e-48 196.1 215 51.6
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 1.0e-47 194.1 203 56.7
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 3.0e-47 192.6 208 52.4
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 8.8e-47 191.0 184 62.5
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 7.4e-46 188.0 190 60.0
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 1.3e-45 187.2 221 51.6
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.7e-45 186.8 157 63.1
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 2.8e-45 186.0 203 54.2
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 4.1e-44 182.2 211 53.6
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 4.1e-44 182.2 202 51.0
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 9.1e-44 181.0 204 52.5
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 4.5e-43 178.7 153 64.7
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 5.9e-43 178.3 208 51.4
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 5.0e-42 175.3 198 54.0
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 1.4e-41 173.7 146 65.8
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 5.2e-39 165.2 192 53.1
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 9.7e-38 161.0 204 45.1
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 1.7e-37 160.2 135 63.0
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 8.2e-37 157.9 186 47.8
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 2.4e-36 156.4 116 69.0
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 2.0e-35 153.3 217 47.5
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 1.0e-31 141.0 143 54.5
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 3.0e-31 139.4 146 43.8
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 4.0e-31 139.0 208 40.4
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 6.7e-31 138.3 142 51.4
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 1.2e-30 137.5 221 44.3
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 4.4e-30 135.6 121 64.5
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 5.7e-30 135.2 201 39.3
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 7.5e-30 134.8 156 46.8
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 7.5e-30 134.8 144 47.9
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 2.8e-29 132.9 197 42.1
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 4.8e-29 132.1 100 62.0
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 3.1e-28 129.4 207 40.1
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 7.0e-28 128.3 200 38.5
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.2e-27 127.5 115 55.7
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 2.0e-27 126.7 160 41.9
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.5e-25 120.6 138 47.1
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 1.6e-24 117.1 195 41.0
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 6.8e-23 111.7 83 54.2
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.5e-22 110.5 122 53.3
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 2.0e-22 110.2 136 44.1
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 5.7e-22 108.6 82 54.9
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 7.5e-22 108.2 203 37.4
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.3e-21 107.5 122 52.5
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 4.8e-21 105.5 143 41.3
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 1.4e-20 104.0 85 54.1
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 5.4e-20 102.1 90 45.6
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 2.0e-19 100.1 192 41.1
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 7.7e-19 98.2 109 51.4
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.0e-18 97.8 137 36.5
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 6.5e-18 95.1 143 36.4
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 4.2e-17 92.4 84 47.6
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 2.1e-16 90.1 101 44.6
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 1.0e-15 87.8 107 50.5
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 2.4e-12 76.6 74 55.4
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 1.2e-11 74.3 75 50.7
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 1.2e-11 74.3 172 33.7
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 4.5e-11 72.4 94 50.0
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 6.6e-10 68.6 112 37.5
AT4G18692 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 3.0e-07 59.7 69 50.7
Ah.00g000610 Amaranthus hybridus HOM05D004429 ORTHO05D005583 5.2e-07 58.9 79 45.6
AT3G53342 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 6.8e-07 58.5 69 50.7


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