Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 3.7e-91 338.2 169 100.0
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 1.6e-70 269.6 175 82.9
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 2.6e-68 262.3 171 83.0
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 7.4e-68 260.8 176 80.1
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.5e-60 236.5 179 73.2
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 4.7e-38 161.8 169 52.7
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 8.0e-38 161.0 170 54.7
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 2.3e-37 159.5 181 51.4
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 4.0e-37 158.7 169 52.1
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 2.6e-36 156.0 166 53.0
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 5.7e-36 154.8 176 51.7
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.5e-36 154.5 173 54.9
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.3e-35 153.7 176 51.7
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.7e-35 153.3 173 54.9
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.7e-35 153.3 176 51.7
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 4.9e-35 151.8 153 55.6
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 4.1e-34 148.7 163 53.4
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 4.1e-34 148.7 142 59.2
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 9.2e-34 147.5 165 54.5
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 1.2e-33 147.1 177 52.5
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 1.6e-33 146.7 159 54.1
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 2.0e-33 146.4 173 54.9
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.8e-33 144.4 182 51.6
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.8e-33 144.4 182 51.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 7.8e-33 144.4 154 55.2
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.3e-32 143.7 162 53.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 2.3e-32 142.9 159 52.2
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 3.9e-32 142.1 156 52.6
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 5.0e-32 141.7 162 52.5
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 6.6e-32 141.4 159 53.5
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.9e-31 139.8 167 52.1
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 3.3e-31 139.0 165 50.3
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 9.5e-31 137.5 165 49.1
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.2e-30 137.1 155 52.3
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 2.8e-30 136.0 144 52.1
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.6e-30 135.6 150 52.0
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 8.0e-30 134.4 153 52.9
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.0e-29 134.0 155 52.9
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.4e-29 133.7 169 50.3
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 3.1e-29 132.5 189 46.6
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 4.0e-29 132.1 155 52.9
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 8.9e-29 131.0 178 47.8
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.5e-28 130.2 167 51.5
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.7e-27 126.7 152 51.3
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.1e-26 124.0 165 47.9
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.4e-26 122.9 129 51.9
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 7.0e-26 121.3 145 49.7
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 7.0e-26 121.3 182 45.6
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-25 120.6 182 46.2
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 6.0e-25 118.2 180 45.0
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 8.6e-24 114.4 157 45.9
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 1.9e-23 113.2 187 43.3
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 3.6e-22 109.0 151 45.7
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 1.1e-21 107.5 150 46.7
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.4e-21 107.1 176 42.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.3e-21 106.3 152 43.4
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 3.1e-21 105.9 163 42.3
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 5.2e-21 105.1 170 42.4
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 5.2e-21 105.1 151 41.1
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 5.2e-21 105.1 153 41.8
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 6.8e-21 104.8 152 43.4
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-20 104.0 159 44.7
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 2.6e-20 102.8 140 46.4
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 2.6e-20 102.8 170 41.8
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 3.4e-20 102.4 164 42.7
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 4.4e-20 102.1 174 42.0
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 4.4e-20 102.1 174 42.0
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 5.8e-20 101.7 158 41.8
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 7.5e-20 101.3 170 41.8
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 9.8e-20 100.9 176 42.0
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.3e-19 100.5 173 41.0
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.3e-19 100.5 173 41.0
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 3.7e-19 99.0 173 41.6
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 3.7e-19 99.0 173 41.6
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 4.9e-19 98.6 169 43.8
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 6.4e-19 98.2 170 40.6
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 6.4e-19 98.2 170 40.6
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 6.4e-19 98.2 170 40.6
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 6.4e-19 98.2 168 41.1
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 8.3e-19 97.8 145 42.8
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 1.4e-18 97.1 173 41.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 1.9e-18 96.7 173 41.6
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 2.4e-18 96.3 176 38.6
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 2.4e-18 96.3 147 40.1
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 4.1e-18 95.5 151 43.0
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 5.4e-18 95.1 149 43.0
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 7.0e-18 94.7 149 39.6
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 7.0e-18 94.7 144 47.9
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 1.2e-17 94.0 166 41.0
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.2e-17 94.0 159 41.5
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.2e-17 94.0 149 39.6
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.6e-17 93.6 204 36.8
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 2.7e-17 92.8 144 43.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 3.5e-17 92.4 162 42.0
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.0e-16 90.9 153 41.2
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.3e-16 90.5 174 42.5
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.3e-16 89.7 161 36.6
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 3.0e-16 89.4 151 36.4
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 5.1e-16 88.6 164 40.2
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 6.6e-16 88.2 181 37.6
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 2.5e-15 86.3 155 40.6
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.6e-14 83.6 145 41.4
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 2.8e-14 82.8 154 40.3
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 4.7e-14 82.0 162 38.3
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.4e-13 80.5 168 39.3
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.3e-13 79.7 165 37.6
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.2e-12 77.4 119 41.2
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.6e-12 76.3 148 38.5
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.7e-11 73.6 140 37.9
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 2.2e-11 73.2 139 36.7
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 3.7e-11 72.4 75 52.0
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 4.9e-11 72.0 116 40.5
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 1.9e-10 70.1 140 36.4
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 2.1e-09 66.6 160 35.0
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 2.7e-09 66.2 153 35.9
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 4.6e-09 65.5 51 62.7
FAN02G3828 Fragaria x ananassa HOM05D006473 ORTHO05D008108 4.3e-07 58.9 118 43.2
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 5.6e-07 58.5 102 40.2
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 9.5e-07 57.8 145 31.7
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 9.5e-07 57.8 144 35.4
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 6.2e-06 55.1 32 71.9


User provided reference genes

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