Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 5.2e-113 411.0 198 100.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 3.3e-43 179.1 119 68.1
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 8.5e-39 164.5 118 64.4
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 1.4e-38 163.7 118 63.6
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 7.2e-30 134.8 117 58.1
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.5e-27 124.8 119 47.1
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 9.7e-27 124.4 122 48.4
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 9.7e-27 124.4 122 48.4
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 1.7e-26 123.6 119 47.1
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.7e-26 123.6 122 48.4
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.7e-26 123.6 119 47.1
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 2.2e-26 123.2 119 47.1
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 6.3e-26 121.7 173 40.5
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.4e-25 120.6 119 45.4
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 2.4e-25 119.8 119 47.1
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.1e-25 119.4 121 43.8
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 4.1e-25 119.0 122 43.4
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 9.1e-25 117.9 184 37.0
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 2.7e-24 116.3 119 42.0
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 3.5e-24 115.9 185 36.8
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 3.5e-24 115.9 122 41.8
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 7.7e-24 114.8 123 43.9
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 1.0e-23 114.4 119 43.7
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 1.7e-23 113.6 119 45.4
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.2e-23 113.2 122 45.9
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 2.2e-23 113.2 123 46.3
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 6.5e-23 111.7 122 45.1
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 8.5e-23 111.3 123 43.1
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.1e-22 110.9 122 43.4
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 1.1e-22 110.9 122 44.3
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.5e-22 110.5 194 35.1
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.9e-22 110.2 194 35.1
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 2.5e-22 109.8 123 43.1
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 2.5e-22 109.8 123 43.9
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 4.2e-22 109.0 162 40.1
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 4.2e-22 109.0 128 42.2
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 5.5e-22 108.6 119 42.0
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 7.2e-22 108.2 122 43.4
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 7.2e-22 108.2 123 43.9
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 7.2e-22 108.2 128 42.2
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 4.7e-21 105.5 122 43.4
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 4.7e-21 105.5 122 44.3
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 4.7e-21 105.5 115 43.5
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 6.1e-21 105.1 122 43.4
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.0e-20 104.4 124 43.5
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 1.0e-20 104.4 127 41.7
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 1.4e-20 104.0 119 42.0
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 2.3e-20 103.2 118 41.5
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 6.8e-20 101.7 150 39.3
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 8.8e-20 101.3 142 40.1
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 8.8e-20 101.3 122 41.8
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 8.8e-20 101.3 122 41.8
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 1.5e-19 100.5 150 39.3
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 2.0e-19 100.1 127 43.3
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.6e-19 99.8 124 44.4
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 2.6e-19 99.8 120 42.5
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 3.4e-19 99.4 106 46.2
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 4.4e-19 99.0 134 38.8
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 5.7e-19 98.6 121 40.5
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 5.7e-19 98.6 189 37.0
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 5.7e-19 98.6 150 38.7
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.7e-19 98.6 128 41.4
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 5.7e-19 98.6 121 41.3
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 7.5e-19 98.2 150 39.3
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 7.5e-19 98.2 150 38.7
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 7.5e-19 98.2 128 41.4
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 9.8e-19 97.8 126 38.9
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 9.8e-19 97.8 122 40.2
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.7e-18 97.1 122 41.0
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 2.2e-18 96.7 202 32.7
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 2.2e-18 96.7 106 43.4
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 3.7e-18 95.9 122 41.0
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 4.8e-18 95.5 139 38.8
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 6.3e-18 95.1 126 40.5
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 6.3e-18 95.1 122 41.8
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.1e-17 94.4 110 42.7
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.4e-17 94.0 126 37.3
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 2.4e-17 93.2 142 40.1
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 5.4e-17 92.0 122 38.5
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 9.1e-17 91.3 190 31.6
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 1.2e-16 90.9 112 41.1
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 2.0e-16 90.1 165 37.6
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 2.7e-16 89.7 106 41.5
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 2.7e-16 89.7 120 37.5
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 4.5e-16 89.0 106 37.7
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 4.5e-16 89.0 106 40.6
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 7.7e-16 88.2 119 37.0
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 7.7e-16 88.2 142 38.7
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 7.7e-16 88.2 142 38.7
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.0e-15 87.8 136 35.3
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 1.7e-15 87.0 119 39.5
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 1.7e-15 87.0 151 36.4
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 2.2e-15 86.7 119 39.5
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 3.8e-15 85.9 119 39.5
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 8.5e-15 84.7 119 39.5
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 1.1e-14 84.3 121 38.8
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 1.9e-14 83.6 186 33.9
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 2.5e-14 83.2 117 40.2
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.5e-14 83.2 118 41.5
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 5.5e-14 82.0 86 45.3
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 7.2e-14 81.6 89 44.9
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 9.4e-14 81.3 109 42.2
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.7e-13 79.7 109 41.3
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.7e-13 79.7 109 39.4
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 2.7e-13 79.7 110 40.9
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 3.6e-13 79.3 112 40.2
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 3.6e-13 79.3 111 40.5
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 3.6e-13 79.3 111 40.5
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 4.7e-13 79.0 110 40.9
PSO782G1409 Papaver somniferum HOM05D002733 ORTHO05D003856 1.0e-12 77.8 107 42.1
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 1.4e-12 77.4 106 39.6
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.4e-12 77.4 110 39.1
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.8e-12 77.0 111 38.7
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 2.3e-12 76.6 106 35.8
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 3.0e-12 76.3 110 39.1
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 5.2e-12 75.5 123 35.8
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 5.2e-12 75.5 127 33.9
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 6.8e-12 75.1 170 33.5
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 6.8e-12 75.1 124 39.5
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 6.8e-12 75.1 124 39.5
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 6.8e-12 75.1 124 39.5
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 6.8e-12 75.1 124 39.5
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 6.8e-12 75.1 106 38.7
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.5e-11 73.9 111 39.6
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 4.4e-11 72.4 98 42.9
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 5.7e-11 72.0 102 38.2
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 5.7e-11 72.0 193 33.2
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 5.7e-11 72.0 120 39.2
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 5.7e-11 72.0 120 40.0
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 5.7e-11 72.0 118 34.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 7.5e-11 71.6 124 39.5
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 9.8e-11 71.2 110 37.3
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 9.8e-11 71.2 93 44.1
COL.COLO4_00094 Corchorus olitorius HOM05D002733 ORTHO05D003856 2.2e-10 70.1 76 43.4
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.8e-10 69.7 114 37.7
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 2.8e-10 69.7 121 35.5
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 2.8e-10 69.7 121 35.5
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 2.8e-10 69.7 121 35.5
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.9e-10 68.9 147 30.6
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 4.9e-10 68.9 127 37.8
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.3e-10 68.6 173 30.1
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.3e-10 68.6 104 36.5
Nitab4.5_0005564g0030 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.4e-09 67.4 113 34.5
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.8e-09 67.0 107 36.4
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 2.4e-09 66.6 118 32.2
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 3.1e-09 66.2 106 36.8
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.1e-09 65.9 108 36.1
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 4.1e-09 65.9 101 35.6
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.4e-09 65.5 195 27.7
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.2e-09 64.7 114 33.3
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.7e-08 63.2 105 35.2
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.7e-08 63.2 104 34.6
Dinv26718 Davidia involucrata HOM05D002733 ORTHO05D003856 2.7e-08 63.2 81 44.4
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 7.7e-08 61.6 113 34.5
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 1.0e-07 61.2 117 34.2
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 1.0e-07 61.2 117 34.2
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.3e-07 60.1 93 35.5
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 2.3e-07 60.1 114 32.5
Aa31LG7G1540 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.9e-07 59.7 116 35.3
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.9e-07 59.7 114 32.5
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 2.9e-07 59.7 114 34.2
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 2.9e-07 59.7 114 34.2
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 8.6e-07 58.2 117 33.3
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.1e-06 57.8 104 32.7
Thhalv10003384m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 1.1e-06 57.8 117 30.8
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.5e-06 57.4 79 41.8
Aa31LG8G17190 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.6e-06 55.5 105 31.4
FAN28G2808 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.6e-06 55.5 62 40.3
MELO3C010987.2 Cucumis melo HOM05D000896 ORTHO05D000594 9.5e-06 54.7 126 30.2


User provided reference genes

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