Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.9e-130 469.2 234 100.0
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 2.5e-90 335.9 213 80.3
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.8e-75 286.6 221 73.8
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.5e-74 283.5 217 69.1
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 6.2e-73 278.1 216 68.1
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 2.4e-72 276.2 213 68.1
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 6.9e-72 274.6 214 68.2
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 3.4e-71 272.3 218 66.1
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 3.4e-71 272.3 201 68.7
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 4.5e-71 271.9 226 65.0
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 7.6e-71 271.2 213 64.3
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 9.9e-71 270.8 211 64.9
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 9.9e-71 270.8 216 63.9
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.3e-70 270.4 214 66.8
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.7e-70 270.0 227 62.6
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.7e-70 270.0 213 64.3
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 2.9e-70 269.2 214 67.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 2.9e-70 269.2 214 67.3
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 3.8e-70 268.9 218 65.1
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.8e-70 268.9 215 64.7
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.1e-69 267.3 217 65.4
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.1e-69 267.3 210 64.8
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.2e-69 265.8 211 65.9
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 3.2e-69 265.8 217 65.4
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 4.2e-69 265.4 203 65.0
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 4.2e-69 265.4 217 67.7
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 7.1e-69 264.6 209 66.0
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 7.1e-69 264.6 214 65.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 9.3e-69 264.2 211 65.9
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 1.2e-68 263.8 148 83.1
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.2e-68 263.8 216 64.4
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.2e-68 263.8 209 67.0
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.6e-68 263.5 213 66.2
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 2.1e-68 263.1 213 65.3
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.1e-68 263.1 210 66.2
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.7e-68 262.7 213 65.3
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 2.7e-68 262.7 217 63.6
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 4.6e-68 261.9 201 68.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 6.0e-68 261.5 199 65.8
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 7.9e-68 261.2 184 70.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 7.9e-68 261.2 209 65.1
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 7.9e-68 261.2 200 68.0
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.3e-67 260.4 169 76.9
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.3e-67 260.4 147 82.3
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.8e-67 260.0 210 66.7
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.8e-67 260.0 186 70.4
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.8e-67 260.0 213 64.3
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 2.3e-67 259.6 203 66.0
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.0e-67 259.2 194 66.5
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 3.0e-67 259.2 174 73.0
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 3.9e-67 258.8 196 69.4
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 3.9e-67 258.8 183 70.5
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 3.9e-67 258.8 183 70.5
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 3.9e-67 258.8 216 66.2
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.9e-67 258.8 216 63.4
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 3.9e-67 258.8 176 72.7
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 5.1e-67 258.5 209 64.6
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 5.1e-67 258.5 185 71.9
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 6.7e-67 258.1 211 64.0
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 6.7e-67 258.1 213 64.3
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.5e-66 256.9 150 80.7
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.5e-66 256.9 198 65.7
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 5.6e-66 255.0 212 64.6
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 5.6e-66 255.0 213 62.4
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 9.6e-66 254.2 231 61.0
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.6e-65 253.4 213 62.4
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 8.1e-65 251.1 200 64.5
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.4e-64 250.4 205 63.9
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.0e-63 246.5 171 71.3
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.0e-63 246.5 147 78.2
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 3.4e-63 245.7 218 59.2
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 3.4e-63 245.7 225 60.0
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 4.5e-63 245.4 206 61.7
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.2e-62 243.0 211 61.1
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 3.8e-62 242.3 199 63.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.8e-62 242.3 215 60.5
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 6.5e-62 241.5 188 65.4
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 8.4e-62 241.1 169 69.8
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.9e-61 240.0 194 64.9
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.5e-61 239.6 215 60.0
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 4.2e-61 238.8 174 66.7
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 9.3e-61 237.7 142 78.2
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.2e-60 237.3 142 79.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 4.6e-60 235.3 181 64.1
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.0e-59 234.2 213 59.6
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.0e-59 234.2 142 78.9
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 8.7e-59 231.1 206 61.2
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 4.3e-58 228.8 181 63.5
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-58 228.0 144 74.3
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.1e-56 224.2 193 62.2
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.4e-56 223.8 189 59.3
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.8e-56 223.4 130 80.0
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 3.2e-53 212.6 194 60.3
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 5.1e-51 205.3 112 83.9
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 6.3e-49 198.4 217 53.0
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 8.2e-49 198.0 217 53.0
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 1.1e-48 197.6 114 78.1
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 2.4e-48 196.4 174 62.6
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.1e-48 195.7 297 42.8
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.1e-45 187.6 110 78.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 7.9e-44 181.4 173 57.8
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 8.8e-43 177.9 105 80.0
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 7.4e-42 174.9 204 49.0
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.4e-40 170.6 134 71.6
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 9.7e-34 147.9 177 50.3
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 6.3e-33 145.2 85 77.6
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 5.9e-31 138.7 170 50.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.8e-27 127.1 76 75.0
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 8.8e-27 124.8 72 77.8
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 4.1e-24 115.9 141 48.2
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 4.5e-23 112.5 68 75.0
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.2e-15 87.8 96 49.0
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.8e-09 66.6 43 65.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-08 62.4 67 53.7


User provided reference genes

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