Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.8e-131 472.6 241 100.0
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 2.3e-110 402.5 241 84.6
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 6.6e-110 401.0 241 83.8
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.3e-105 386.7 241 81.7
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 5.4e-80 301.6 241 64.3
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 1.6e-79 300.1 243 64.2
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.1e-79 299.7 240 65.0
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 7.8e-79 297.7 248 63.3
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 5.1e-78 295.0 229 65.1
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 5.1e-78 295.0 243 64.2
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.5e-77 293.5 255 61.6
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.9e-77 293.1 241 59.8
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 2.5e-77 292.7 214 68.2
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 2.5e-77 292.7 259 60.2
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 9.6e-77 290.8 229 64.2
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 2.8e-76 289.3 218 66.5
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.6e-76 288.9 224 66.1
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 4.7e-76 288.5 210 68.1
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 4.7e-76 288.5 240 63.3
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.1e-75 287.3 210 67.6
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 1.4e-75 287.0 214 67.3
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 1.8e-75 286.6 214 66.4
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.4e-75 286.2 240 62.9
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 4.0e-75 285.4 210 68.6
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 8.9e-75 284.3 210 68.1
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.5e-74 283.5 243 61.7
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.5e-74 283.5 212 65.6
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 2.0e-74 283.1 213 65.7
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 7.6e-74 281.2 223 63.2
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 7.6e-74 281.2 244 60.2
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 9.9e-74 280.8 210 66.7
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.7e-73 280.0 216 63.4
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 2.2e-73 279.6 241 59.8
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 3.8e-73 278.9 217 64.5
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 6.4e-73 278.1 222 62.6
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 6.4e-73 278.1 241 59.8
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 6.4e-73 278.1 224 59.4
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 8.4e-73 277.7 227 60.8
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 8.4e-73 277.7 223 62.8
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 1.4e-72 276.9 252 58.3
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.4e-72 276.9 215 61.9
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.4e-72 276.2 241 59.3
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 3.2e-72 275.8 308 51.0
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 5.4e-72 275.0 211 64.0
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 9.3e-72 274.2 222 62.6
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 9.3e-72 274.2 241 59.3
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 9.3e-72 274.2 212 65.6
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.2e-71 273.9 241 58.9
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 1.6e-71 273.5 220 61.8
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 6.0e-71 271.6 218 61.9
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.3e-70 270.4 241 58.5
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.7e-70 270.0 218 61.5
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 5.1e-70 268.5 211 63.5
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 1.5e-69 266.9 215 58.6
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.9e-69 266.5 215 60.0
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 3.3e-69 265.8 214 59.8
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 7.3e-69 264.6 223 60.1
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 9.6e-69 264.2 252 56.3
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.3e-68 263.8 215 62.8
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 2.1e-68 263.1 210 60.5
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 6.2e-68 261.5 223 57.8
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 8.1e-68 261.2 217 61.8
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 1.1e-67 260.8 229 57.6
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 2.4e-67 259.6 210 61.0
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 9.0e-67 257.7 211 59.7
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.2e-66 257.3 210 60.5
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 3.4e-66 255.8 220 58.6
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 5.8e-66 255.0 214 58.4
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 7.6e-66 254.6 241 55.6
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.3e-65 253.8 220 55.0
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 2.2e-65 253.1 224 56.7
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 2.9e-65 252.7 212 57.5
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 3.8e-65 252.3 215 58.1
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 8.4e-65 251.1 220 57.3
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.1e-64 250.8 219 57.5
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.4e-64 250.4 220 56.8
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 3.2e-64 249.2 211 58.3
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 4.2e-64 248.8 211 58.3
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 5.4e-64 248.4 212 57.5
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 7.1e-64 248.1 211 58.3
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 7.1e-64 248.1 211 58.3
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 9.3e-64 247.7 212 57.5
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 1.2e-63 247.3 215 57.7
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 2.7e-63 246.1 211 55.5
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 4.6e-63 245.4 219 54.3
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 6.0e-63 245.0 211 55.5
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 7.9e-63 244.6 211 55.5
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 1.0e-62 244.2 224 55.8
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 1.1e-61 240.7 216 57.9
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.9e-61 240.0 211 54.5
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 4.3e-61 238.8 211 54.0
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 7.4e-61 238.0 211 54.5
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 9.6e-61 237.7 224 56.2
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 9.6e-61 237.7 241 51.9
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.3e-60 237.3 189 57.1
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 9.0e-59 231.1 273 48.7
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 2.6e-58 229.6 207 56.5
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 2.2e-57 226.5 225 52.0
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.2e-57 226.5 222 50.9
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 4.9e-57 225.3 212 52.4
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 6.0e-55 218.4 157 69.4
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.5e-53 213.8 143 69.2
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.0e-51 205.7 210 52.4
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 4.9e-49 198.7 213 48.8
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.1e-48 197.6 138 69.6
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.2e-48 196.1 139 66.9
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 4.2e-48 195.7 143 67.8
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 5.5e-48 195.3 142 67.6
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.0e-38 164.5 211 45.5
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 3.1e-35 152.9 122 59.8
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 2.7e-31 139.8 113 59.3
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 4.5e-26 122.5 191 37.2
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 4.4e-13 79.3 126 36.5
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.7e-12 77.4 215 29.8
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 4.7e-07 59.3 207 27.1
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.8e-06 57.4 54 59.3


User provided reference genes

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