Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027001 Sechium edule HOM05D006911 ORTHO05D006663 1.0e-38 162.9 82 100.0
CSS0014266 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.3e-12 76.3 67 61.2
CSS0033096 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.3e-12 76.3 67 61.2
Prupe.3G175200 Prunus persica HOM05D006911 ORTHO05D006663 2.1e-12 75.5 79 54.4
MD17G1137200 Malus domestica HOM05D006911 ORTHO05D006663 6.2e-12 73.9 83 50.6
Manes.07G101802 Manihot esculenta HOM05D006911 ORTHO05D006663 6.2e-12 73.9 72 58.3
Thecc.01G170800 Theobroma cacao HOM05D006911 ORTHO05D006663 6.2e-12 73.9 71 57.7
Potri.005G203800 Populus trichocarpa HOM05D006911 ORTHO05D006663 8.2e-12 73.6 71 56.3
MD09G1150000 Malus domestica HOM05D006911 ORTHO05D006663 1.1e-11 73.2 83 50.6
Duzib133G0070 Durio zibethinus HOM05D006911 ORTHO05D006663 1.4e-11 72.8 70 57.1
QL08p044828 Quercus lobata HOM05D006911 ORTHO05D006663 2.4e-11 72.0 68 64.7
FvH4_6g38520 Fragaria vesca HOM05D006911 ORTHO05D006663 4.0e-11 71.2 69 59.4
FAN02G1638 Fragaria x ananassa HOM05D006911 ORTHO05D006663 4.0e-11 71.2 69 59.4
FAN14G5866 Fragaria x ananassa HOM05D006911 ORTHO05D006663 4.0e-11 71.2 69 59.4
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 4.0e-11 71.2 71 54.9
COL.COLO4_07174 Corchorus olitorius HOM05D006911 ORTHO05D006663 5.3e-11 70.9 74 55.4
Cfa023065 Carpinus fangiana HOM05D006911 ORTHO05D006663 1.2e-10 69.7 68 58.8
Haze_13522 Corylus avellana HOM05D006911 ORTHO05D006663 1.2e-10 69.7 68 58.8
Glyma.08G308500 Glycine max HOM05D006911 ORTHO05D006663 2.0e-10 68.9 73 53.4
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 3.4e-10 68.2 69 52.2
RcHm_v2.0_Chr2g0151771 Rosa chinensis HOM05D006911 ORTHO05D006663 3.4e-10 68.2 68 57.4
LjContig00049g0014504 Lotus japonicus HOM05D006911 ORTHO05D006663 1.0e-09 66.6 67 52.2
Potri.002G058400 Populus trichocarpa HOM05D006911 ORTHO05D006663 2.9e-09 65.1 71 53.5
Cpa.g.sc50.102 Carica papaya HOM05D006911 ORTHO05D006663 3.8e-09 64.7 67 55.2
CiPaw.04G139200 Carya illinoinensis HOM05D006911 ORTHO05D006663 5.0e-09 64.3 70 55.7
Phvul.006G031600 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 5.0e-09 64.3 71 52.1
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 6.5e-09 63.9 68 54.4
Ciclev10033778m.g Citrus clementina HOM05D006911 ORTHO05D006663 7.1e-08 60.5 76 52.6
Gohir.D11G163600 Gossypium hirsutum HOM05D006911 ORTHO05D006663 9.3e-08 60.1 68 50.0
Gorai.007G174300 Gossypium raimondii HOM05D006911 ORTHO05D006663 9.3e-08 60.1 68 50.0
Gohir.A11G156500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.6e-07 59.3 64 51.6
TWI14G1424 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 2.1e-07 58.9 68 55.9
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 3.5e-07 58.2 74 52.7
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 4.6e-07 57.8 72 47.2
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 6.1e-07 57.4 74 52.7
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 6.1e-07 57.4 74 52.7
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 6.1e-07 57.4 74 48.6
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 3.0e-06 55.1 70 51.4
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 8.7e-06 53.5 73 46.6


User provided reference genes

Program Settings