Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 0.0e+00 1609.0 840 100.0
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 0.0e+00 1352.0 841 85.9
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 0.0e+00 1268.8 803 84.7
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 0.0e+00 1234.2 821 81.0
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.2e-296 1023.1 804 68.0
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 4.8e-293 1011.1 862 64.4
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 6.3e-293 1010.7 863 64.3
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.2e-291 1006.5 856 64.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.7e-285 986.1 810 65.6
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 4.5e-283 978.0 852 62.1
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 5.9e-283 977.6 842 62.5
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.7e-282 976.1 826 63.6
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.2e-282 975.7 862 60.9
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.9e-281 972.6 851 62.3
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 4.7e-280 968.0 852 62.4
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.3e-279 965.7 873 60.3
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.8e-277 958.7 772 65.5
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.3e-277 957.6 746 67.8
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.8e-276 956.1 865 60.7
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 3.5e-275 951.8 796 64.4
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 4.5e-275 951.4 817 63.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.0e-271 940.3 827 62.3
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 8.3e-269 930.6 826 62.1
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.1e-268 930.2 790 63.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.4e-268 929.9 856 60.3
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 3.2e-268 928.7 803 62.6
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.2e-264 916.8 830 60.6
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.8e-264 915.6 771 64.1
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 3.1e-263 912.1 853 59.3
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.3e-261 906.7 793 61.8
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 7.0e-260 901.0 794 61.2
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 9.2e-260 900.6 716 66.3
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.5e-259 898.7 810 60.2
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.0e-258 897.1 773 62.6
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 8.6e-258 894.0 813 58.4
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 7.3e-257 891.0 799 62.2
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.1e-255 887.1 773 62.6
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 1.8e-255 886.3 774 61.8
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 2.0e-254 882.9 805 59.9
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 4.9e-253 878.2 788 60.4
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.2e-252 875.5 805 59.8
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.0e-250 870.5 812 58.0
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 5.8e-246 854.7 818 57.6
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 3.7e-245 852.0 786 59.8
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.9e-245 851.7 750 62.5
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.2e-243 847.0 820 58.8
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.1e-243 846.3 846 55.8
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 2.3e-242 842.8 795 58.9
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 1.1e-241 840.5 807 56.9
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 5.6e-241 838.2 789 58.7
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.8e-240 835.9 760 58.4
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.7e-240 835.1 786 60.2
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 6.8e-239 831.2 786 59.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 4.4e-238 828.6 775 57.5
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.9e-237 825.9 839 55.2
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 3.8e-237 825.5 760 59.1
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 4.9e-237 825.1 845 54.9
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.9e-237 825.1 830 55.3
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 8.4e-237 824.3 759 59.9
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 8.4e-237 824.3 774 58.7
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.1e-236 823.9 839 55.1
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.1e-236 823.9 809 57.2
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 4.2e-236 822.0 843 54.7
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.2e-235 820.5 772 59.2
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 4.6e-235 818.5 749 60.7
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 4.6e-235 818.5 752 58.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.0e-234 817.4 759 59.3
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.0e-234 815.8 777 56.5
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 8.7e-234 814.3 840 55.4
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.1e-233 813.9 796 57.4
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 2.5e-233 812.8 781 57.9
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 2.1e-232 809.7 841 55.1
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 5.3e-231 805.1 804 55.3
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 3.9e-226 788.9 854 52.9
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.1e-223 779.2 904 50.6
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.0e-222 776.5 788 55.6
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 1.3e-221 773.9 764 57.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 4.9e-221 771.9 779 54.3
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.6e-219 766.9 695 61.0
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 8.7e-218 761.1 855 53.8
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.1e-217 760.8 839 54.0
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.5e-211 739.2 699 57.9
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 2.2e-200 703.4 775 49.8
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.8e-197 692.6 779 50.2
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 5.0e-197 692.2 719 53.0
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 6.7e-194 681.8 536 66.2
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.2e-190 671.0 753 50.9
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.7e-174 616.7 490 65.7
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.0e-173 614.8 594 57.7
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 5.0e-173 612.5 787 46.1
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 6.1e-171 605.5 638 53.8
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.4e-170 604.4 582 57.2
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 8.5e-165 585.1 793 47.0
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.2e-163 581.3 480 64.0
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.3e-162 577.0 528 59.7
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.0e-161 573.9 700 49.9
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 3.8e-157 559.7 629 51.5
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.2e-147 528.1 565 53.3
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.1e-146 523.5 520 55.2
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 5.8e-145 519.2 494 57.3
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 7.1e-127 459.1 870 36.8
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.9e-125 453.4 786 36.5
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 4.6e-102 376.7 836 33.7
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 9.3e-87 325.9 365 47.1
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.5e-84 318.5 275 64.0
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 3.9e-77 293.9 616 33.0
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-75 288.9 235 66.8
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 3.7e-75 287.3 203 69.5
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.8e-75 287.0 272 57.7
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.6e-65 255.4 845 28.3
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.3e-61 241.5 210 56.7
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.0e-60 238.4 251 53.4
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.7e-54 218.0 856 25.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 6.6e-24 117.1 140 50.0
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 4.0e-21 107.8 158 41.1
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 8.1e-14 83.6 154 38.3
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 1.4e-13 82.8 68 57.4
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.4e-13 82.8 113 45.1
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 3.4e-12 78.2 128 42.2


User provided reference genes

Program Settings