Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.7e-73 279.3 144 100.0
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 3.0e-25 119.0 121 59.5
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 3.9e-25 118.6 121 59.5
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 1.8e-22 109.8 121 56.2
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 3.1e-22 109.0 114 58.8
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.7e-17 93.2 121 49.6
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 1.1e-16 90.5 116 46.6
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.1e-16 90.5 119 43.7
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.5e-16 90.1 119 47.9
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.5e-16 90.1 120 44.2
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 1.9e-16 89.7 150 38.7
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.9e-16 89.7 121 47.1
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 3.3e-16 89.0 120 44.2
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 4.3e-16 88.6 118 43.2
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 4.3e-16 88.6 119 45.4
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 5.6e-16 88.2 115 44.3
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 5.6e-16 88.2 116 45.7
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 7.3e-16 87.8 120 41.7
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.3e-15 87.0 117 41.0
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.3e-15 87.0 117 41.9
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.3e-15 87.0 118 42.4
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 1.6e-15 86.7 118 44.9
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.6e-15 86.7 119 46.2
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 1.6e-15 86.7 120 42.5
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 2.1e-15 86.3 118 42.4
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 2.8e-15 85.9 119 44.5
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 2.8e-15 85.9 114 46.5
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 2.8e-15 85.9 116 44.0
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 3.6e-15 85.5 117 41.9
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 4.8e-15 85.1 119 43.7
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 6.2e-15 84.7 120 42.5
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 6.2e-15 84.7 120 39.2
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 6.2e-15 84.7 117 45.3
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 6.2e-15 84.7 114 45.6
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 8.1e-15 84.3 120 40.8
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 8.1e-15 84.3 113 45.1
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.1e-14 84.0 114 44.7
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.1e-14 84.0 114 43.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.1e-14 84.0 114 44.7
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.4e-14 83.6 113 44.2
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 1.4e-14 83.6 114 43.9
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.4e-14 83.6 114 43.9
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.4e-14 83.6 119 43.7
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 1.4e-14 83.6 119 39.5
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 2.4e-14 82.8 120 40.0
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.1e-14 82.4 114 43.9
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 3.1e-14 82.4 116 43.1
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 4.0e-14 82.0 119 42.0
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 4.0e-14 82.0 113 43.4
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 6.9e-14 81.3 114 43.0
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 6.9e-14 81.3 117 41.0
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 6.9e-14 81.3 120 40.0
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 9.0e-14 80.9 114 42.1
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 1.2e-13 80.5 117 41.0
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 1.2e-13 80.5 117 41.0
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.2e-13 80.5 117 39.3
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.2e-13 80.5 118 40.7
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.5e-13 80.1 119 44.5
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.5e-13 80.1 116 42.2
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.0e-13 79.7 114 41.2
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.6e-13 79.3 119 40.3
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 2.6e-13 79.3 115 41.7
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 3.4e-13 79.0 116 38.8
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 3.4e-13 79.0 117 40.2
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 5.8e-13 78.2 100 47.0
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 5.8e-13 78.2 117 38.5
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 7.6e-13 77.8 117 39.3
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 9.9e-13 77.4 118 42.4
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 9.9e-13 77.4 118 42.4
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 9.9e-13 77.4 118 42.4
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 9.9e-13 77.4 117 41.9
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.3e-12 77.0 120 40.0
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.3e-12 77.0 118 42.4
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 1.7e-12 76.6 117 39.3
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 1.7e-12 76.6 117 39.3
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 1.7e-12 76.6 122 40.2
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 2.2e-12 76.3 118 39.0
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 2.9e-12 75.9 122 36.1
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.9e-12 75.1 117 41.0
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 4.9e-12 75.1 121 42.1
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 8.4e-12 74.3 106 41.5
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.4e-11 73.6 114 38.6
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.9e-11 73.2 117 40.2
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 2.4e-11 72.8 117 39.3
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 2.4e-11 72.8 115 38.3
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 5.4e-11 71.6 118 41.5
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 5.4e-11 71.6 117 35.0
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.6e-10 70.1 94 42.6
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 3.5e-10 68.9 58 55.2
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 3.5e-10 68.9 115 34.8
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 6.0e-10 68.2 113 37.2
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 7.9e-10 67.8 120 40.0
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 7.9e-10 67.8 116 37.1
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 7.9e-10 67.8 110 37.3
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.0e-09 67.4 138 35.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.3e-09 67.0 119 37.8
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.3e-09 67.0 120 39.2
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.8e-09 66.6 113 37.2
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 3.0e-09 65.9 112 37.5
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 3.9e-09 65.5 50 60.0
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 5.1e-09 65.1 122 36.9
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 6.7e-09 64.7 47 68.1
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 6.7e-09 64.7 115 36.5
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 1.1e-08 63.9 50 58.0
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.1e-08 63.9 100 37.0
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.9e-08 63.2 50 58.0
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 3.3e-08 62.4 104 37.5
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 5.6e-08 61.6 100 38.0
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.3e-07 60.5 122 35.2
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 1.6e-07 60.1 124 33.9
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 2.1e-07 59.7 103 35.9
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 4.8e-07 58.5 122 33.6
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 4.0e-06 55.5 101 37.6


User provided reference genes

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