Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 2.9e-240 834.7 397 100.0
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 2.1e-193 679.1 397 81.6
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 1.5e-188 662.9 394 80.2
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.7e-187 659.4 395 79.7
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 6.7e-136 488.0 392 61.5
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 3.3e-135 485.7 397 59.9
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.3e-134 483.8 394 58.9
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 5.5e-130 468.4 386 60.1
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 2.7e-129 466.1 391 57.8
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.8e-128 463.4 395 59.0
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 2.3e-128 463.0 392 60.7
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 9.7e-127 457.6 391 57.8
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.3e-126 457.2 389 58.6
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 2.2e-126 456.4 383 59.5
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 3.7e-126 455.7 389 58.6
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.7e-126 455.7 389 58.9
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 3.7e-126 455.7 394 58.6
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 4.1e-125 452.2 389 58.4
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 7.7e-124 448.0 386 56.7
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 2.2e-123 446.4 396 57.1
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.9e-123 446.0 396 57.8
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 6.5e-123 444.9 404 55.0
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 3.2e-122 442.6 385 58.4
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 7.2e-122 441.4 397 57.4
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 2.7e-121 439.5 402 57.0
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 2.7e-121 439.5 395 56.2
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.6e-121 439.1 400 56.5
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 4.7e-121 438.7 387 56.1
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 2.3e-120 436.4 386 56.2
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 8.8e-120 434.5 384 57.3
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 3.4e-119 432.6 395 55.7
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 4.4e-119 432.2 394 56.1
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 1.3e-118 430.6 393 55.5
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 2.8e-118 429.5 386 55.7
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 6.3e-118 428.3 393 55.0
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 8.3e-118 427.9 384 55.5
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 1.1e-117 427.6 385 55.8
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.1e-117 427.6 385 55.3
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.1e-117 427.6 385 55.3
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.1e-117 427.6 386 56.0
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 1.8e-117 426.8 392 56.6
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 3.1e-117 426.0 398 55.3
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 1.2e-116 424.1 387 54.8
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.2e-116 424.1 400 55.8
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 1.6e-116 423.7 388 55.9
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 2.0e-116 423.3 398 55.3
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 2.7e-116 422.9 383 55.9
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 7.7e-116 421.4 369 56.6
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 1.0e-115 421.0 399 53.9
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 2.9e-115 419.5 401 54.9
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 5.0e-115 418.7 402 55.0
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 8.5e-115 417.9 393 54.2
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 1.1e-114 417.5 397 54.2
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 2.5e-114 416.4 383 55.4
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 7.2e-114 414.8 391 55.5
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 7.2e-114 414.8 392 55.1
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 2.1e-113 413.3 388 54.1
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 4.7e-113 412.1 401 54.1
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 2.3e-112 409.8 404 52.0
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 8.8e-112 407.9 384 54.2
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 4.4e-111 405.6 372 55.4
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 2.8e-110 402.9 393 51.1
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 3.7e-110 402.5 366 55.5
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 4.8e-110 402.1 394 51.5
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.8e-109 400.2 298 64.1
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.2e-108 397.5 367 54.5
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.0e-107 394.4 407 50.9
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 1.0e-107 394.4 430 48.1
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 5.0e-107 392.1 399 52.6
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 1.1e-106 391.0 333 58.3
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 3.3e-106 389.4 320 60.0
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 1.6e-105 387.1 393 53.4
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 2.8e-105 386.3 394 51.8
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 2.8e-105 386.3 396 52.8
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 2.3e-104 383.3 394 49.5
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 3.4e-103 379.4 393 52.4
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 3.5e-100 369.4 370 53.0
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.5e-100 369.0 447 47.9
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 1.9e-98 363.6 369 49.9
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.2e-92 344.4 413 47.0
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 6.6e-91 338.6 392 46.7
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 4.7e-89 332.4 277 59.6
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 2.2e-86 323.6 398 45.7
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 3.7e-86 322.8 330 50.6
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 6.4e-86 322.0 324 51.9
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 4.1e-85 319.3 231 64.5
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 6.0e-84 315.5 313 51.1
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 2.8e-81 306.6 294 51.7
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 1.1e-80 304.7 416 43.3
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 4.1e-77 292.7 332 46.1
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 4.1e-77 292.7 467 40.0
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 1.7e-75 287.3 380 42.6
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 2.5e-74 283.5 385 43.1
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 3.3e-74 283.1 316 48.4
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 1.4e-72 277.7 390 41.8
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 1.7e-62 244.2 278 47.8
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.7e-60 236.9 179 60.9
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 7.9e-60 235.3 275 45.1
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 9.3e-53 211.8 129 72.1
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 4.6e-52 209.5 142 66.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 8.7e-51 205.3 307 41.0
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 1.1e-50 204.9 251 45.4
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 3.4e-47 193.4 272 41.9
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 1.0e-46 191.8 105 83.8
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 8.4e-46 188.7 231 45.9
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.5e-45 187.2 153 57.5
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 1.6e-44 184.5 121 66.1
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 2.1e-44 184.1 241 44.4
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 9.6e-42 175.3 285 38.6
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 2.1e-41 174.1 112 69.6
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 4.8e-41 172.9 102 70.6
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 6.2e-41 172.6 253 41.9
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 3.8e-38 163.3 202 42.1
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.3e-35 154.8 92 76.1
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 9.0e-32 142.1 89 75.3
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 2.3e-27 127.5 111 57.7
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 9.7e-26 122.1 131 48.9
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 2.2e-22 110.9 84 57.1
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 2.5e-21 107.5 212 33.0
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 2.7e-20 104.0 68 66.2
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-17 94.0 102 45.1
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-17 94.0 102 45.1
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 2.0e-15 87.8 49 75.5
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 7.7e-15 85.9 95 48.4
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 2.5e-13 80.9 72 54.2
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 1.6e-12 78.2 84 53.6
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 8.0e-12 75.9 69 53.6
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 8.8e-11 72.4 49 61.2
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-10 71.6 49 61.2
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 3.1e-08 63.9 79 51.9
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 1.6e-07 61.6 84 38.1
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 2.2e-06 57.8 146 24.7
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 2.2e-06 57.8 146 24.7


User provided reference genes

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