Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 3.0e-64 248.4 131 100.0
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 1.0e-32 143.7 99 76.8
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 7.4e-31 137.5 99 73.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 2.6e-28 129.0 110 65.5
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 1.4e-18 96.7 178 39.3
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.5e-12 76.6 99 46.5
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.2e-11 72.8 102 47.1
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 6.5e-11 71.2 92 45.7
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 6.5e-11 71.2 107 44.9
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 8.4e-11 70.9 103 41.7
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 1.1e-10 70.5 108 43.5
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 2.5e-10 69.3 102 49.0
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.6e-09 66.6 104 40.4
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.1e-09 66.2 104 41.3
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 4.6e-09 65.1 100 40.0
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 4.6e-09 65.1 104 41.3
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 6.1e-09 64.7 83 44.6
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.0e-08 63.9 77 48.1
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 2.3e-08 62.8 91 40.7
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 3.9e-08 62.0 103 41.7
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.1e-07 60.5 100 40.0
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.1e-07 60.5 125 36.8
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.1e-07 60.5 125 36.8
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.1e-07 60.5 99 37.4
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.9e-07 59.7 146 37.0
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 2.5e-07 59.3 81 44.4
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.3e-07 58.9 104 39.4
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 3.3e-07 58.9 86 41.9
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 4.3e-07 58.5 119 36.1
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 4.3e-07 58.5 99 36.4
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 5.7e-07 58.2 62 48.4
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 9.7e-07 57.4 58 48.3
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 9.7e-07 57.4 135 35.6
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.3e-06 57.0 77 44.2
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.3e-06 57.0 89 40.4
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 1.3e-06 57.0 74 45.9
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.6e-06 56.6 109 37.6
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 1.6e-06 56.6 68 42.6
TAR374G0331 Trochodendron aralioides HOM05D007643 ORTHO05D007801 2.2e-06 56.2 90 42.2
Sc12g0006930 Simmondsia chinensis HOM05D007643 ORTHO05D007801 6.3e-06 54.7 107 39.3
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 8.2e-06 54.3 82 35.4
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 8.2e-06 54.3 55 49.1


User provided reference genes

Program Settings