Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.2e-154 548.9 272 100.0
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.3e-118 428.7 271 77.1
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 8.2e-117 424.1 271 77.9
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 3.2e-113 412.1 273 76.2
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 9.4e-81 304.3 206 69.4
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.6e-80 303.5 269 57.6
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-78 297.4 233 59.7
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 1.5e-78 297.0 208 64.9
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.5e-78 297.0 208 64.4
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 7.5e-78 294.7 210 64.8
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 3.7e-77 292.4 272 55.9
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 9.1e-76 287.7 270 51.9
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.6e-75 287.0 206 64.6
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 4.5e-75 285.4 274 56.6
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 4.5e-75 285.4 270 51.9
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 4.5e-75 285.4 206 66.0
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 7.7e-75 284.6 221 61.5
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 3.8e-74 282.3 273 55.3
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 6.5e-74 281.6 215 61.9
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 6.5e-74 281.6 264 52.7
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.5e-74 281.6 274 56.6
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 8.5e-74 281.2 218 63.3
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.5e-73 279.6 274 56.6
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 5.5e-73 278.5 207 63.3
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 7.2e-73 278.1 268 54.5
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.2e-72 277.3 274 54.0
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.2e-72 277.3 252 56.7
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.6e-72 276.9 274 55.8
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 2.1e-72 276.6 271 53.1
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 3.6e-72 275.8 247 55.9
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.6e-72 275.8 247 55.9
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 8.0e-72 274.6 214 60.3
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 8.0e-72 274.6 214 59.8
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 1.0e-71 274.2 203 63.1
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.4e-71 273.9 262 53.4
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 2.3e-71 273.1 208 61.5
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 5.2e-71 271.9 218 61.9
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 8.8e-71 271.2 221 59.3
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.2e-70 270.8 212 57.5
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 2.0e-70 270.0 218 59.2
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.0e-70 270.0 274 52.9
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.6e-70 269.6 260 53.5
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.6e-70 269.6 247 55.5
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 3.4e-70 269.2 221 58.8
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 7.5e-70 268.1 273 52.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 7.5e-70 268.1 273 52.4
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 7.5e-70 268.1 240 56.2
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 9.8e-70 267.7 217 58.5
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.3e-69 267.3 271 50.6
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 1.7e-69 266.9 188 67.6
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 3.7e-69 265.8 203 61.6
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 6.3e-69 265.0 213 56.3
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 8.3e-69 264.6 217 57.1
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.8e-68 263.5 246 56.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 2.4e-68 263.1 212 60.4
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.4e-68 261.9 210 61.9
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 9.2e-68 261.2 217 59.0
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 9.2e-68 261.2 273 50.9
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.5e-67 259.2 245 52.2
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 3.5e-67 259.2 275 50.5
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 7.7e-67 258.1 210 61.0
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.0e-66 257.7 227 55.5
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.3e-66 256.5 214 60.3
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 3.8e-66 255.8 219 56.6
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 3.8e-66 255.8 240 52.5
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 6.6e-66 255.0 228 54.4
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.5e-65 253.8 208 55.3
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 3.3e-65 252.7 210 58.6
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 9.5e-65 251.1 223 56.5
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 3.6e-64 249.2 212 57.5
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 3.6e-64 249.2 212 57.5
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.8e-63 246.9 204 59.8
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.8e-63 246.9 270 50.0
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 2.3e-63 246.5 208 57.7
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.0e-63 246.1 212 57.1
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.0e-63 246.1 212 57.1
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.0e-63 246.1 212 57.1
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.2e-63 245.4 204 59.3
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.2e-62 244.2 198 59.6
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.5e-62 243.8 198 59.1
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 2.2e-61 240.0 198 58.6
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.7e-61 239.2 221 54.8
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.1e-60 237.7 238 52.5
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.0e-59 233.4 232 52.6
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 4.6e-59 232.3 198 58.1
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 1.1e-57 227.6 248 50.0
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.5e-57 227.3 220 53.6
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 3.3e-57 226.1 225 53.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.2e-56 224.2 194 56.7
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.6e-56 223.8 231 50.6
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 3.6e-56 222.6 203 50.2
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 4.7e-56 222.2 231 51.9
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.4e-52 209.9 199 52.8
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 5.4e-52 208.8 209 48.3
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 4.6e-51 205.7 223 48.9
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.6e-48 197.2 225 47.6
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.2e-47 192.2 209 46.4
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.2e-47 192.2 209 46.4
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.1e-44 182.6 198 50.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 4.1e-44 182.6 151 55.0
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.0e-42 177.9 150 59.3
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.7e-42 177.2 150 56.0
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 2.8e-40 169.9 184 50.0
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 8.9e-31 138.3 226 35.4
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 4.9e-29 132.5 164 45.1
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 8.4e-29 131.7 188 36.2
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 9.9e-22 108.2 191 37.7
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 8.4e-21 105.1 186 31.7
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.0e-18 98.2 65 70.8
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 5.1e-18 95.9 75 58.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.5e-17 93.6 179 32.4
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 4.0e-15 86.3 64 62.5
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 7.6e-14 82.0 124 33.9
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.3e-13 81.3 148 31.1
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 2.5e-09 67.0 69 50.7
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 7.4e-09 65.5 69 49.3
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.6e-06 57.0 42 61.9


User provided reference genes

Program Settings