Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 3.1e-181 638.3 310 100.0
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.8e-160 569.3 310 89.0
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 3.9e-155 551.6 310 86.5
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 6.2e-153 544.3 324 83.0
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 6.0e-140 501.1 350 73.1
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 4.7e-137 491.5 310 74.5
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 1.5e-135 486.5 303 76.2
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 9.9e-135 483.8 310 73.5
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 9.9e-135 483.8 311 72.3
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 5.4e-133 478.0 307 73.6
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.6e-132 476.5 305 72.1
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.5e-132 475.3 305 74.1
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 3.5e-132 475.3 310 71.9
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 6.0e-132 474.6 305 71.8
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 1.0e-131 473.8 305 73.8
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 8.7e-131 470.7 308 72.1
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 2.5e-130 469.2 310 72.6
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 3.3e-130 468.8 310 71.6
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 5.6e-130 468.0 310 72.6
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 7.3e-130 467.6 305 73.8
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 7.3e-130 467.6 305 72.5
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 4.8e-129 464.9 316 69.3
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 6.2e-129 464.5 310 69.7
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 6.2e-129 464.5 303 72.3
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 2.4e-128 462.6 305 72.1
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 5.3e-128 461.5 308 70.8
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.5e-127 459.9 305 72.1
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 1.5e-127 459.9 311 71.4
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 2.0e-127 459.5 305 71.5
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 3.4e-127 458.8 305 71.8
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 5.8e-127 458.0 307 69.7
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 1.3e-126 456.8 310 69.4
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.7e-126 456.4 310 70.3
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 6.4e-126 454.5 310 68.1
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.2e-125 452.2 310 69.7
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 5.4e-125 451.4 311 70.7
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 9.3e-125 450.7 307 68.1
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 9.3e-125 450.7 310 71.0
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.1e-124 449.5 310 68.7
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 6.0e-124 448.0 336 65.5
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.3e-123 446.8 310 68.1
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 1.3e-123 446.8 310 68.1
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.3e-123 446.8 311 68.5
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 3.0e-123 445.7 306 69.9
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.9e-123 445.3 305 68.2
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.9e-122 443.0 310 66.1
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 1.9e-122 443.0 281 74.0
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.9e-122 443.0 305 68.2
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 3.3e-122 442.2 310 67.7
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 4.3e-122 441.8 310 65.8
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 4.3e-122 441.8 303 67.3
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 5.6e-122 441.4 302 68.5
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 7.4e-122 441.0 303 69.3
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 3.7e-121 438.7 305 67.9
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 3.7e-121 438.7 276 72.8
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 8.1e-121 437.6 301 69.4
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.4e-120 436.8 315 65.1
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 1.4e-120 436.8 305 66.2
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 1.8e-120 436.4 306 67.3
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.8e-120 436.4 305 67.9
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.1e-120 435.6 307 65.5
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 5.3e-120 434.9 338 61.5
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 5.8e-119 431.4 305 65.6
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.7e-118 429.9 310 66.5
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 2.2e-118 429.5 310 66.5
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.9e-118 429.1 302 65.9
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 2.9e-118 429.1 305 67.5
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 6.4e-118 427.9 310 65.8
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 6.4e-118 427.9 316 64.9
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 8.4e-118 427.6 289 70.2
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.9e-117 426.4 310 66.1
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 2.4e-117 426.0 302 65.6
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 3.2e-117 425.6 282 73.4
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 5.5e-117 424.9 302 64.6
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.2e-116 423.7 293 65.9
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.2e-116 423.7 302 65.9
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.1e-116 422.9 334 60.8
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 7.9e-116 421.0 310 64.8
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 1.3e-115 420.2 305 64.6
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 1.3e-115 420.2 298 66.8
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.1e-114 417.2 305 64.6
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.3e-114 415.2 310 65.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.6e-113 413.3 308 63.6
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.2e-113 411.4 282 70.9
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 1.1e-112 410.6 310 63.9
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.7e-110 403.3 307 63.5
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 8.4e-110 401.0 283 67.8
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 5.5e-109 398.3 357 56.3
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 7.9e-108 394.4 335 58.8
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.0e-107 392.5 285 68.1
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 7.4e-106 387.9 310 61.6
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 2.2e-105 386.3 369 53.7
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 2.9e-94 349.4 313 55.6
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 3.8e-94 349.0 302 57.9
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 1.4e-93 347.1 308 56.2
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 4.2e-93 345.5 315 58.1
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 7.2e-93 344.7 302 57.3
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.2e-92 344.0 302 56.3
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.9e-91 339.0 305 55.4
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 4.8e-89 332.0 282 60.3
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 8.2e-89 331.3 298 54.4
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 3.1e-88 329.3 218 71.6
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.5e-86 321.2 223 66.8
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 9.4e-85 317.8 301 52.2
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.6e-84 315.8 283 56.2
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 1.8e-83 313.5 224 67.0
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.3e-73 280.8 192 71.9
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.7e-73 280.4 197 67.0
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 4.1e-72 275.8 311 45.3
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 2.9e-70 269.6 201 65.2
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 3.2e-69 266.2 194 63.9
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 4.2e-69 265.8 200 64.0
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 4.4e-66 255.8 167 73.7
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 5.4e-64 248.8 215 57.7
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 2.7e-63 246.5 235 54.9
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 8.6e-54 214.9 401 35.7
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 3.3e-53 213.0 207 53.1
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 4.7e-52 209.1 305 41.3
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.2e-50 204.5 137 70.8
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 4.6e-47 192.6 170 56.5
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 6.6e-46 188.7 149 57.0
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.5e-39 166.4 131 61.1
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 9.5e-37 158.3 301 34.9
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.4e-34 149.8 107 61.7
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 2.2e-33 147.1 291 34.7
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 3.9e-30 136.3 113 55.8
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.6e-28 129.8 279 30.8
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.9e-25 120.2 83 63.9
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 7.1e-24 115.5 144 43.8
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.2e-16 89.7 83 54.2
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 7.3e-13 79.0 161 32.9
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.1e-11 75.1 51 66.7
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.1e-11 73.6 79 45.6
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 9.0e-11 72.0 59 54.2
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 9.9e-10 68.6 91 42.9
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 1.2e-07 61.6 36 83.3
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 7.9e-07 58.9 55 49.1


User provided reference genes

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