Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026700 Sechium edule HOM05D001966 ORTHO05D007227 1.7e-31 138.7 67 100.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.8e-18 94.7 95 60.0
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 6.2e-18 93.6 95 58.9
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 3.1e-17 91.3 97 56.7
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 1.2e-16 89.4 95 56.8
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 1.2e-16 89.4 95 56.8
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.5e-16 89.0 95 55.8
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 2.0e-16 88.6 97 55.7
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 2.6e-16 88.2 95 55.8
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.9e-15 84.7 92 54.3
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 3.8e-15 84.3 95 54.7
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 3.8e-15 84.3 95 54.7
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 3.8e-15 84.3 95 54.7
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 3.8e-15 84.3 95 54.7
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 6.4e-15 83.6 76 61.8
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-14 82.8 95 53.7
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 1.4e-14 82.4 95 54.7
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 1.4e-14 82.4 95 54.7
SHI36394 Sapria himalayana HOM05D001966 ORTHO05D007227 1.4e-14 82.4 77 61.0
arahy.Tifrunner.gnm1.ann1.I9YN8I Arachis hypogaea HOM05D001966 ORTHO05D007227 9.3e-14 79.7 94 50.0
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 9.3e-14 79.7 95 50.5
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 9.3e-14 79.7 77 59.7
EL10Ac8g19705 Beta vulgaris HOM05D001966 ORTHO05D007227 3.0e-12 74.7 97 50.5
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-11 72.0 70 57.1
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-11 72.0 70 57.1
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-11 72.0 70 57.1
arahy.Tifrunner.gnm1.ann1.6ZZ12G Arachis hypogaea HOM05D001966 ORTHO05D007227 4.3e-11 70.9 93 48.4
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 2.8e-10 68.2 93 47.3
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.4e-09 65.1 65 55.4
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 3.4e-08 61.2 65 49.2
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.0e-07 59.7 55 58.2
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.7e-07 58.9 85 48.2
Atru.chr9.266 Acer truncatum HOM05D001966 ORTHO05D007227 8.4e-07 56.6 47 61.7
Oeu041170.1 Olea europaea HOM05D000708 ORTHO05D007227 3.2e-06 54.7 32 81.2
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 3.2e-06 54.7 69 46.4
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC29t60498H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC29t60539H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC29t60556H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC35t60683H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC35t60713H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC44t60814H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC44t60831H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC45t60900H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC45t60918H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC46t60967H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BolSC49t61133H Brassica oleracea HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BraSC103t45419Z Brassica rapa HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BraSC25t45921Z Brassica rapa HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BraSC59t46509Z Brassica rapa HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
BraSC59t46540Z Brassica rapa HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 63.4
ClCG11G009300 Citrullus lanatus HOM05D001966 ORTHO05D007227 4.2e-06 54.3 41 65.9
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 5.5e-06 53.9 41 63.4
Psat5g118880 Pisum sativum HOM05D001966 ORTHO05D007227 9.3e-06 53.1 47 59.6


User provided reference genes

Program Settings