Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 9.0e-176 620.2 316 100.0
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 9.1e-144 513.8 346 76.3
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.6e-140 503.1 345 74.5
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 6.1e-140 501.1 352 75.0
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 8.3e-121 437.6 285 72.3
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 9.2e-120 434.1 289 70.9
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 5.9e-119 431.4 289 69.9
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 5.9e-119 431.4 285 71.6
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 7.8e-119 431.0 289 69.9
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.3e-118 430.3 289 70.6
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.9e-118 429.1 287 70.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 8.6e-118 427.6 285 70.5
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.9e-117 426.4 285 70.5
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.5e-117 426.0 285 70.2
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 2.5e-117 426.0 287 70.7
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 1.2e-116 423.7 289 68.2
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 3.6e-116 422.2 286 69.6
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 8.0e-116 421.0 285 69.5
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.4e-115 420.2 283 71.0
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.8e-115 419.9 287 67.9
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 4.0e-115 418.7 283 68.9
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 4.0e-115 418.7 289 68.9
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 6.8e-115 417.9 287 69.0
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 8.9e-115 417.5 285 69.8
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 3.4e-114 415.6 285 68.1
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 4.4e-114 415.2 284 67.3
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 9.8e-114 414.1 287 67.9
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.3e-113 413.7 284 68.7
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.7e-113 413.3 285 67.7
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 3.7e-113 412.1 285 68.4
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 4.9e-113 411.8 281 69.4
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 8.3e-113 411.0 285 65.6
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 8.3e-113 411.0 285 67.7
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.1e-112 410.6 282 69.9
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.4e-112 410.2 282 68.8
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 3.2e-112 409.1 286 68.5
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 3.2e-112 409.1 286 67.8
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 5.4e-112 408.3 259 74.1
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 7.0e-112 407.9 285 66.7
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.6e-111 406.8 286 66.4
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.6e-111 406.8 286 67.5
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 3.5e-111 405.6 284 68.3
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.5e-111 405.6 282 67.7
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 4.6e-111 405.2 284 68.0
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.8e-111 404.4 286 67.5
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.0e-110 404.1 286 66.4
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.3e-110 403.7 283 67.5
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.7e-110 403.3 284 66.9
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.7e-110 403.3 284 66.2
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.3e-110 402.9 286 66.1
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.3e-110 402.9 334 60.2
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 3.0e-110 402.5 286 65.0
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 3.9e-110 402.1 331 59.5
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 3.9e-110 402.1 284 65.8
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 3.9e-110 402.1 285 66.3
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 5.0e-110 401.7 285 66.3
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 5.0e-110 401.7 278 68.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 5.0e-110 401.7 281 67.3
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.5e-109 400.2 284 66.5
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 1.5e-109 400.2 284 66.5
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.5e-109 399.4 284 67.3
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 2.5e-109 399.4 287 66.9
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 2.5e-109 399.4 329 60.8
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.3e-109 398.7 285 66.0
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 7.3e-109 397.9 318 59.7
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 9.5e-109 397.5 285 66.7
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 1.6e-108 396.7 332 59.3
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 2.1e-108 396.4 332 59.0
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.1e-108 396.4 282 64.9
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 3.6e-108 395.6 344 58.1
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 3.6e-108 395.6 284 65.8
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 4.7e-108 395.2 301 63.5
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 8.0e-108 394.4 247 73.3
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 8.0e-108 394.4 285 66.3
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 8.0e-108 394.4 285 66.3
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 8.0e-108 394.4 283 64.7
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 8.0e-108 394.4 244 74.6
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.1e-107 394.0 245 73.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 1.4e-107 393.7 283 64.3
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 2.0e-106 389.8 244 73.0
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 7.5e-106 387.9 285 61.8
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 2.9e-105 386.0 288 64.6
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.5e-101 372.9 246 67.9
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.1e-100 369.8 307 60.3
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 3.6e-100 369.0 262 66.8
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 4.0e-99 365.5 311 57.6
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 8.9e-99 364.4 280 62.1
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 5.8e-98 361.7 284 60.2
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 3.7e-97 359.0 287 62.0
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.5e-93 346.3 282 55.7
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 7.3e-93 344.7 304 58.2
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 7.3e-93 344.7 285 55.4
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 4.7e-92 342.0 284 56.7
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.9e-88 330.1 281 55.9
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 2.0e-82 310.1 286 54.2
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 5.3e-75 285.4 199 68.3
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 2.1e-68 263.5 289 46.7
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 5.5e-64 248.8 195 60.5
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 8.7e-54 214.9 144 66.7
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 5.9e-50 202.2 143 67.8
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 7.2e-48 195.3 114 73.7
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 9.4e-48 194.9 110 76.4
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 5.3e-43 179.1 271 38.0
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.4e-42 176.4 105 78.1
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.1e-32 144.8 111 57.7
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 3.7e-28 129.8 92 70.7
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 8.2e-28 128.6 157 43.9
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.8e-27 127.5 99 63.6
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 2.2e-12 77.4 92 46.7
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 2.8e-12 77.0 55 56.4
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.7e-09 67.8 49 59.2
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.3e-08 63.5 42 61.9
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 2.1e-07 60.8 122 33.6


User provided reference genes

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