Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026655 Sechium edule HOM05D000786 ORTHO05D000779 3.2e-43 177.9 85 100.0
ClCG06G004770 Citrullus lanatus HOM05D000786 ORTHO05D000779 1.1e-14 83.2 75 56.0
CsaV3_6G022560 Cucumis sativus L. HOM05D000786 ORTHO05D000779 3.1e-14 81.6 83 50.6
MELO3C021286.2 Cucumis melo HOM05D000786 ORTHO05D000779 1.6e-10 69.3 65 49.2
Nitab4.5_0000116g0100 Nicotiana tabacum HOM05D000786 ORTHO05D000779 1.3e-07 59.7 80 40.0
Nitab4.5_0004002g0020 Nicotiana tabacum HOM05D000786 ORTHO05D000779 1.3e-07 59.7 80 40.0
DCAR_002871 Daucus carota HOM05D000786 ORTHO05D000779 1.7e-07 59.3 51 56.9
PGSC0003DMG400031801 Solanum tuberosum HOM05D000786 ORTHO05D000779 2.2e-07 58.9 79 41.8
Sopen09g030450 Solanum pennellii HOM05D000786 ORTHO05D000779 3.7e-07 58.2 79 41.8
Lalb_Chr15g0077641 Lupinus albus HOM05D000786 ORTHO05D000779 4.8e-07 57.8 38 57.9
Peaxi162Scf00001g00286 Petunia axillaris HOM05D000786 ORTHO05D000779 4.8e-07 57.8 81 40.7
Cpa.g.sc18.2 Carica papaya HOM05D000786 ORTHO05D000779 6.3e-07 57.4 48 54.2
CAN.G668.24 Capsicum annuum HOM05D000786 ORTHO05D000779 8.2e-07 57.0 79 40.5
Manes.05G001600 Manihot esculenta HOM05D000786 ORTHO05D000779 8.2e-07 57.0 45 55.6
HanXRQChr01g0000881 Helianthus annuus HOM05D000786 ORTHO05D000779 1.1e-06 56.6 43 60.5
Lalb_Chr08g0238761 Lupinus albus HOM05D000786 ORTHO05D006216 1.1e-06 56.6 62 43.5
QL02p038248 Quercus lobata HOM05D000786 ORTHO05D006216 1.1e-06 56.6 63 42.9
Thecc.04G295200 Theobroma cacao HOM05D015449 ORTHO05D017881 1.1e-06 56.6 59 45.8
Lsat_1_v5_gn_9_25421 Lactuca sativa HOM05D000786 ORTHO05D000779 1.4e-06 56.2 68 44.1
Solyc09g075650.3 Solanum lycopersicum HOM05D000786 ORTHO05D000779 1.4e-06 56.2 79 40.5
COL.COLO4_23268 Corchorus olitorius HOM05D000786 ORTHO05D000779 1.8e-06 55.8 49 55.1
QL12p028929 Quercus lobata HOM05D000786 ORTHO05D000779 1.8e-06 55.8 54 53.7
SGA_v2.0_scaffold376G50264 Striga asiatica HOM05D000786 ORTHO05D000779 1.8e-06 55.8 48 54.2
Duzib133G0956 Durio zibethinus HOM05D000786 ORTHO05D000779 3.1e-06 55.1 48 54.2
TAR381G0907 Trochodendron aralioides HOM05D000786 ORTHO05D006216 3.1e-06 55.1 61 41.0
Glyma.16G163900 Glycine max HOM05D000786 ORTHO05D006216 4.1e-06 54.7 59 42.4
Potri.014G123600 Populus trichocarpa HOM05D000786 ORTHO05D000779 4.1e-06 54.7 72 43.1
PGR083G1617 Punica granatum HOM05D000786 ORTHO05D000779 4.1e-06 54.7 47 48.9
TWI18G0458 Tripterygium wilfordii HOM05D000786 ORTHO05D000779 4.1e-06 54.7 48 56.2
Manes.03G201501 Manihot esculenta HOM05D000786 ORTHO05D000779 5.3e-06 54.3 67 44.8
GSVIVG01034575001 Vitis vinifera HOM05D000786 ORTHO05D006216 5.3e-06 54.3 59 44.1
Mapoly0050s0122 Marchantia polymorpha HOM05D000786 ORTHO05D000779 6.9e-06 53.9 44 52.3
Phvul.007G082800 Phaseolus vulgaris HOM05D000786 ORTHO05D006216 6.9e-06 53.9 61 42.6
Thecc.08G158200 Theobroma cacao HOM05D000786 ORTHO05D006216 6.9e-06 53.9 60 46.7
MSTRG.21668 Avicennia marina HOM05D000786 ORTHO05D000779 9.1e-06 53.5 48 50.0
CSS0023598 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 9.1e-06 53.5 43 51.2
CANSAT25G1840 Cannabis sativa HOM05D000786 ORTHO05D006216 9.1e-06 53.5 59 44.1
Cfa018290 Carpinus fangiana HOM05D000786 ORTHO05D006216 9.1e-06 53.5 61 37.7
Cc07_g16650 Coffea canephora HOM05D000786 ORTHO05D006216 9.1e-06 53.5 73 38.4
Haze_17797 Corylus avellana HOM05D000786 ORTHO05D006216 9.1e-06 53.5 61 37.7
CsaV3_4G001090 Cucumis sativus L. HOM05D000786 ORTHO05D000779 9.1e-06 53.5 53 49.1
Duzib138G1722 Durio zibethinus HOM05D000786 ORTHO05D000779 9.1e-06 53.5 48 54.2


User provided reference genes

Program Settings