Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 4.0e-48 194.5 104 100.0
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 6.6e-43 177.2 104 89.4
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 9.0e-40 166.8 107 86.9
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 9.3e-37 156.8 107 82.2
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 3.3e-34 148.3 102 74.5
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 4.3e-34 147.9 102 74.5
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 4.3e-34 147.9 99 76.8
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 7.4e-34 147.1 104 71.2
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 7.4e-34 147.1 104 75.0
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 9.6e-34 146.7 104 74.0
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.3e-33 146.4 99 75.8
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.8e-33 145.2 104 72.1
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 6.2e-33 144.1 102 74.5
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 2.4e-32 142.1 105 75.2
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 3.1e-32 141.7 99 73.7
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 4.0e-32 141.4 104 73.1
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 5.3e-32 141.0 108 71.3
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.2e-31 139.8 103 68.9
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.5e-31 139.4 105 73.3
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.5e-31 139.4 96 74.0
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 5.8e-31 137.5 105 72.4
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 3.8e-30 134.8 99 69.7
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 3.8e-30 134.8 103 68.9
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 4.9e-30 134.4 103 69.9
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 4.9e-30 134.4 104 71.2
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 6.5e-30 134.0 101 73.3
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 8.4e-30 133.7 99 71.7
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 8.4e-30 133.7 103 68.9
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 8.4e-30 133.7 104 66.3
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 1.1e-29 133.3 100 73.0
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.9e-29 132.5 105 70.5
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.9e-29 132.5 100 71.0
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.5e-29 132.1 105 69.5
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 2.5e-29 132.1 105 68.6
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 3.2e-29 131.7 100 72.0
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 3.2e-29 131.7 100 72.0
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 3.2e-29 131.7 100 72.0
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 3.2e-29 131.7 100 72.0
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 3.2e-29 131.7 99 72.7
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 5.5e-29 131.0 104 67.3
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 5.5e-29 131.0 103 68.0
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 5.5e-29 131.0 103 68.0
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.2e-28 129.8 103 67.0
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 2.1e-28 129.0 99 70.7
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 2.1e-28 129.0 99 70.7
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 2.7e-28 128.6 99 69.7
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 2.7e-28 128.6 104 66.3
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 3.5e-28 128.3 105 67.6
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.5e-28 128.3 104 65.4
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 4.6e-28 127.9 102 68.6
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 6.0e-28 127.5 104 65.4
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 7.9e-28 127.1 102 65.7
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 1.8e-27 125.9 99 66.7
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 1.8e-27 125.9 100 69.0
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 2.3e-27 125.6 99 67.7
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 3.0e-27 125.2 102 65.7
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 3.0e-27 125.2 104 63.5
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 3.9e-27 124.8 106 67.0
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 5.1e-27 124.4 104 62.5
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 6.7e-27 124.0 104 64.4
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 1.5e-26 122.9 106 63.2
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 1.9e-26 122.5 104 64.4
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 1.9e-26 122.5 104 66.3
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.3e-26 121.7 105 64.8
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 4.3e-26 121.3 102 69.6
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 5.7e-26 120.9 99 65.7
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 5.7e-26 120.9 101 66.3
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 9.6e-26 120.2 105 63.8
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 2.1e-25 119.0 104 63.5
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 2.1e-25 119.0 98 64.3
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 3.7e-25 118.2 104 61.5
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 4.8e-25 117.9 95 64.2
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 4.8e-25 117.9 122 59.8
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 4.8e-25 117.9 106 60.4
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.1e-24 116.7 101 65.3
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.4e-24 115.5 101 65.3
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 4.1e-24 114.8 103 63.1
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.2e-23 113.2 101 63.4
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.5e-22 107.5 101 57.4
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 8.4e-22 107.1 103 59.2
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.9e-21 105.9 81 71.6
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 4.2e-21 104.8 81 70.4
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 5.5e-21 104.4 98 60.2
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 7.2e-21 104.0 86 62.8
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 1.2e-20 103.2 81 69.1
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 1.0e-19 100.1 102 59.8
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 3.9e-19 98.2 113 52.2
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.1e-18 96.7 67 74.6
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 1.5e-18 96.3 67 76.1
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 1.5e-18 96.3 101 54.5
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.5e-18 96.3 64 81.2
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 2.5e-18 95.5 109 52.3
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 2.8e-17 92.0 102 52.9
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 1.8e-16 89.4 66 74.2
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 2.4e-16 89.0 64 73.4
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 6.9e-16 87.4 67 68.7
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 7.7e-15 84.0 68 61.8
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 1.3e-14 83.2 54 77.8
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.7e-14 82.8 80 56.2
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 1.7e-14 82.8 66 66.7
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 5.0e-14 81.3 52 82.7
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 1.4e-13 79.7 50 84.0
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 4.2e-13 78.2 50 74.0
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 4.2e-13 78.2 53 79.2
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-11 72.8 55 72.7
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 1.8e-11 72.8 53 73.6
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.3e-09 66.6 39 82.1
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 7.7e-07 57.4 100 38.0


User provided reference genes

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