Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 6.4e-57 223.8 108 100.0
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 7.9e-55 216.9 107 97.2
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 1.6e-31 139.4 110 61.8
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 6.9e-27 124.0 107 57.9
Sed0020637 Sechium edule HOM05D008623 ORTHO05D007789 9.1e-19 97.1 104 49.0
Sed0023023 Sechium edule HOM05D008623 ORTHO05D007789 2.7e-15 85.5 111 44.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 5.7e-13 77.8 108 40.7
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.4e-13 77.4 108 41.7
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-12 76.6 102 39.2
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-12 76.6 102 40.2
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-12 76.6 102 39.2
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.7e-12 76.3 114 38.6
Sed0009066 Sechium edule HOM05D008623 ORTHO05D007789 4.1e-11 71.6 66 51.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 9.1e-11 70.5 95 41.1
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-10 70.1 102 38.2
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 2.6e-10 68.9 100 38.0
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.6e-10 68.9 102 40.2
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 5.9e-10 67.8 106 37.7
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 5.9e-10 67.8 104 36.5
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 5.9e-10 67.8 104 36.5
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 5.9e-10 67.8 103 39.8
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 2.2e-09 65.9 100 36.0
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 2.2e-09 65.9 102 39.2
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.9e-09 65.5 107 36.4
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.0e-09 64.7 107 33.6
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.1e-08 63.5 107 34.6
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 1.5e-08 63.2 95 37.9
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.9e-08 62.8 102 35.3
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.2e-08 62.0 72 45.8
Sed0008488 Sechium edule HOM05D034586 ORTHO05D007789 4.2e-08 61.6 69 47.8
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.4e-08 60.5 88 35.2
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 9.4e-08 60.5 101 33.7
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.4e-08 60.5 110 38.2
arahy.Tifrunner.gnm1.ann1.W55X99 Arachis hypogaea HOM05D010841 ORTHO05D007789 1.6e-07 59.7 88 36.4
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.1e-07 59.3 67 43.3
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 2.7e-07 58.9 73 43.8
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 3.6e-07 58.5 107 34.6
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 4.7e-07 58.2 121 31.4
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.7e-07 58.2 128 31.2
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 6.1e-07 57.8 91 37.4
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 6.1e-07 57.8 93 34.4
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.0e-07 57.4 108 36.1
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.4e-06 56.6 102 31.4
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 2.3e-06 55.8 105 32.4
Lju4319C0T1 Lonicera japonica HOM05D011954 ORTHO05D014236 3.0e-06 55.5 103 33.0
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 4.0e-06 55.1 109 33.9
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.2e-06 54.7 107 33.6
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.2e-06 54.7 107 33.6
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 6.7e-06 54.3 88 34.1
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 8.8e-06 53.9 66 36.4
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.8e-06 53.9 82 37.8


User provided reference genes

Program Settings