Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 9.4e-65 250.0 121 100.0
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 1.3e-34 149.8 130 63.8
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 2.3e-34 149.1 136 61.0
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 3.6e-32 141.7 122 63.9
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 1.4e-28 129.8 118 59.3
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 2.2e-13 79.3 104 45.2
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 8.3e-13 77.4 94 47.9
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 8.3e-13 77.4 94 47.9
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 5.4e-12 74.7 117 35.9
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 5.4e-12 74.7 123 35.8
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 2.1e-11 72.8 123 38.2
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 1.3e-10 70.1 109 36.7
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 5.1e-10 68.2 104 39.4
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.1e-09 67.0 101 42.6
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 1.5e-09 66.6 101 41.6
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 3.3e-09 65.5 118 38.1
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 3.3e-09 65.5 133 34.6
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 7.3e-09 64.3 102 40.2
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 7.3e-09 64.3 104 38.5
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.2e-08 63.5 113 38.9
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.1e-08 62.8 96 38.5
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 2.8e-08 62.4 80 42.5
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 3.6e-08 62.0 113 38.9
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 3.6e-08 62.0 111 32.4
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 3.6e-08 62.0 120 34.2
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 6.2e-08 61.2 100 37.0
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.1e-07 60.5 88 39.8
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 1.4e-07 60.1 102 35.3
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.4e-07 60.1 126 34.9
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 3.1e-07 58.9 111 35.1
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 4.0e-07 58.5 66 43.9
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 5.2e-07 58.2 99 37.4
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 5.2e-07 58.2 66 39.4
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 5.2e-07 58.2 99 37.4
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 5.2e-07 58.2 99 37.4
COL.COLO4_05473 Corchorus olitorius HOM05D008155 ORTHO05D010411 1.2e-06 57.0 96 36.5
THA.LOC104802769 Tarenaya hassleriana HOM05D008255 ORTHO05D011943 2.0e-06 56.2 113 32.7
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 2.0e-06 56.2 94 37.2
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 2.0e-06 56.2 100 31.0
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 2.6e-06 55.8 119 34.5
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 2.6e-06 55.8 123 34.1
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 2.6e-06 55.8 104 32.7
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 3.4e-06 55.5 49 51.0
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 5.8e-06 54.7 98 36.7
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 7.6e-06 54.3 97 34.0
CARHR080400 Cardamine hirsuta HOM05D024382 ORTHO05D011943 7.6e-06 54.3 95 38.9
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 7.6e-06 54.3 48 50.0
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 7.6e-06 54.3 48 50.0
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 7.6e-06 54.3 42 57.1
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 9.9e-06 53.9 103 37.9


User provided reference genes

Program Settings