Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 1.4e-46 189.1 89 100.0
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 1.3e-42 176.0 88 92.0
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.1e-41 172.9 88 89.8
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 1.4e-41 172.6 88 87.5
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 7.0e-41 170.2 87 88.5
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 1.2e-40 169.5 85 91.8
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 1.2e-40 169.5 88 86.4
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 2.0e-40 168.7 85 91.8
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 3.5e-40 167.9 84 90.5
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 4.5e-40 167.5 85 91.8
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 5.9e-40 167.2 84 91.7
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 5.9e-40 167.2 84 91.7
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 5.9e-40 167.2 84 91.7
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 7.7e-40 166.8 85 88.2
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 1.3e-39 166.0 88 86.4
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.3e-39 166.0 85 90.6
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.7e-39 165.6 85 89.4
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 2.2e-39 165.2 87 83.9
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 2.2e-39 165.2 84 89.3
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 2.9e-39 164.9 85 88.2
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 2.9e-39 164.9 85 88.2
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 2.9e-39 164.9 85 89.4
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 3.8e-39 164.5 84 88.1
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 3.8e-39 164.5 85 88.2
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 5.0e-39 164.1 84 89.3
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 5.0e-39 164.1 84 89.3
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 5.0e-39 164.1 85 87.1
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 5.0e-39 164.1 80 92.5
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 5.0e-39 164.1 84 86.9
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 5.0e-39 164.1 84 89.3
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 6.5e-39 163.7 88 80.7
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 8.5e-39 163.3 84 86.9
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 1.4e-38 162.5 83 86.7
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.4e-38 162.5 83 86.7
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.4e-38 162.5 83 86.7
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.4e-38 162.5 83 86.7
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 1.4e-38 162.5 85 85.9
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 2.5e-38 161.8 84 86.9
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 2.5e-38 161.8 84 86.9
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.5e-38 161.8 85 84.7
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.5e-38 161.8 85 84.7
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.5e-38 161.8 85 84.7
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 3.2e-38 161.4 88 79.5
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 3.2e-38 161.4 85 84.7
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 7.2e-38 160.2 85 83.5
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 7.2e-38 160.2 84 85.7
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 9.4e-38 159.8 84 85.7
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 9.4e-38 159.8 84 85.7
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 1.2e-37 159.5 84 83.3
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 1.6e-37 159.1 84 85.7
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 1.6e-37 159.1 84 85.7
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 1.6e-37 159.1 84 85.7
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 2.1e-37 158.7 85 82.4
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 3.6e-37 157.9 85 82.4
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 3.6e-37 157.9 89 79.8
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.7e-37 157.5 79 87.3
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.7e-37 157.5 85 83.5
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 6.1e-37 157.1 83 84.3
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 8.0e-37 156.8 85 82.4
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 1.0e-36 156.4 85 83.5
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.0e-36 156.4 85 81.2
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.0e-36 156.4 85 82.4
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 1.4e-36 156.0 84 83.3
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.4e-36 156.0 85 81.2
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 1.8e-36 155.6 85 81.2
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.3e-36 155.2 89 76.4
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 2.3e-36 155.2 88 78.4
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 5.2e-36 154.1 85 80.0
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 5.2e-36 154.1 81 82.7
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 5.2e-36 154.1 85 78.8
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 6.7e-36 153.7 85 80.0
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-35 152.9 85 80.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-35 152.9 85 80.0
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-35 152.9 85 80.0
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-35 152.9 85 80.0
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 1.1e-35 152.9 85 80.0
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 1.5e-35 152.5 85 77.6
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 1.5e-35 152.5 85 78.8
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 1.5e-35 152.5 85 78.8
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 1.5e-35 152.5 84 81.0
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 2.0e-35 152.1 85 83.5
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 2.0e-35 152.1 88 76.1
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 2.0e-35 152.1 88 76.1
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 2.0e-35 152.1 84 83.3
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 2.6e-35 151.8 85 78.8
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.6e-35 151.8 83 78.3
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.6e-35 151.8 85 82.4
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 2.6e-35 151.8 87 77.0
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 2.6e-35 151.8 87 77.0
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 3.3e-35 151.4 85 78.8
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 3.3e-35 151.4 85 78.8
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 3.3e-35 151.4 85 78.8
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 3.3e-35 151.4 85 78.8
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 4.4e-35 151.0 83 84.3
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 4.4e-35 151.0 83 84.3
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 7.4e-35 150.2 81 80.2
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 1.7e-34 149.1 69 95.7
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 78.8
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 4.8e-34 147.5 85 76.5
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 8.2e-34 146.7 81 81.5
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.1e-33 146.4 84 76.2
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 5.3e-33 144.1 85 77.6
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 5.9e-32 140.6 83 78.3
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 7.7e-32 140.2 83 71.1
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.5e-31 136.7 85 74.1
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 8.5e-31 136.7 84 75.0
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.1e-30 136.3 83 73.5
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 1.5e-30 136.0 83 72.3
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 3.2e-30 134.8 88 67.0
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 3.2e-30 134.8 77 77.9
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 5.5e-30 134.0 85 71.8
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 8.8e-28 126.7 70 74.3
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.2e-27 126.3 84 67.9
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 4.4e-27 124.4 84 69.0
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 1.1e-25 119.8 84 67.9
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.8e-25 119.0 84 61.9
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 3.6e-21 104.8 70 68.6
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 3.6e-21 104.8 70 68.6
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 4.7e-21 104.4 89 48.3
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 6.3e-18 94.0 53 73.6
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 8.3e-18 93.6 82 47.6
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 9.1e-17 90.1 78 50.0
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 1.7e-15 85.9 42 83.3
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 4.2e-14 81.3 78 43.6
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 1.2e-13 79.7 85 41.2
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 4.1e-09 64.7 84 46.4
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 5.4e-09 64.3 41 78.0
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 4.5e-08 61.2 56 51.8


User provided reference genes

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