Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 4.7e-109 397.9 204 100.0
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 9.2e-97 357.1 207 90.3
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.8e-93 345.5 205 83.9
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 8.1e-93 344.0 206 84.5
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 8.4e-74 280.8 210 69.5
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 3.2e-73 278.9 198 72.2
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 5.4e-73 278.1 207 70.5
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 9.3e-73 277.3 208 71.2
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 9.3e-73 277.3 201 70.1
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 9.3e-73 277.3 201 68.2
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 2.1e-72 276.2 207 69.1
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.7e-72 275.8 203 71.9
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 2.7e-72 275.8 203 71.9
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 4.6e-72 275.0 203 71.4
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 4.6e-72 275.0 209 68.4
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 1.0e-71 273.9 211 66.4
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.3e-71 273.5 205 66.3
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.7e-71 273.1 211 67.8
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.3e-71 272.7 207 68.1
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 3.9e-71 271.9 202 68.8
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 3.9e-71 271.9 207 68.1
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 3.9e-71 271.9 207 68.1
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 3.9e-71 271.9 215 71.2
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.9e-70 269.6 207 67.6
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 5.6e-70 268.1 208 67.8
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 7.3e-70 267.7 214 69.6
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 9.6e-70 267.3 212 66.5
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.6e-69 266.5 202 68.8
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 2.1e-69 266.2 213 67.6
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 2.8e-69 265.8 201 67.2
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 6.2e-69 264.6 208 66.3
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 8.1e-69 264.2 206 68.0
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.1e-68 262.3 207 65.7
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 5.3e-68 261.5 213 64.3
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 5.3e-68 261.5 205 69.8
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 6.9e-68 261.2 145 84.8
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 1.2e-67 260.4 212 66.5
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 1.2e-67 260.4 212 66.5
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 1.2e-67 260.4 208 68.3
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.5e-67 260.0 215 63.7
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.5e-67 260.0 192 67.2
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 2.0e-67 259.6 192 67.2
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 2.6e-67 259.2 204 67.2
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 2.6e-67 259.2 202 68.8
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 7.6e-67 257.7 214 66.4
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 9.9e-67 257.3 205 66.8
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.3e-66 256.9 206 65.0
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.3e-66 256.9 216 64.8
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.9e-66 255.0 208 65.4
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 6.4e-66 254.6 197 66.0
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 8.4e-66 254.2 179 72.1
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 1.1e-65 253.8 207 64.7
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 1.4e-65 253.4 140 85.0
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 3.2e-65 252.3 211 63.5
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 4.2e-65 251.9 204 67.2
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 5.4e-65 251.5 203 65.5
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 5.4e-65 251.5 201 64.7
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 7.1e-65 251.1 195 67.2
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.2e-64 250.4 207 64.7
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 1.2e-64 250.4 201 64.2
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.6e-64 250.0 206 63.6
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.1e-64 249.6 205 64.4
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 2.7e-64 249.2 211 66.8
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 2.7e-64 249.2 211 63.0
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 3.5e-64 248.8 163 71.8
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.5e-64 248.8 211 67.3
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 6.0e-64 248.1 208 64.4
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 1.3e-63 246.9 211 64.0
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.3e-63 246.9 176 69.9
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 1.7e-63 246.5 158 76.6
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 2.3e-63 246.1 201 66.7
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.0e-63 245.7 222 59.9
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 3.9e-63 245.4 161 72.7
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 6.6e-63 244.6 161 72.7
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 8.7e-63 244.2 211 63.5
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 8.7e-63 244.2 210 63.3
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.5e-62 243.4 158 71.5
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 1.5e-62 243.4 161 70.2
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 1.5e-62 243.4 196 67.9
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 3.3e-62 242.3 161 69.6
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 4.3e-62 241.9 161 72.7
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 4.3e-62 241.9 161 69.6
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 4.3e-62 241.9 161 69.6
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 4.3e-62 241.9 161 69.6
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 7.4e-62 241.1 161 72.0
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 1.6e-61 240.0 200 67.5
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 1.6e-61 240.0 184 66.3
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.8e-60 236.5 135 80.7
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 1.8e-60 236.5 175 68.0
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 2.4e-60 236.1 161 70.8
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.0e-59 233.0 137 79.6
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.5e-57 224.9 207 59.9
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 2.7e-56 222.6 139 72.7
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 6.7e-55 218.0 165 63.6
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 2.8e-53 212.6 129 76.7
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 5.8e-51 204.9 200 55.5
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.1e-49 200.7 174 62.6
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 5.3e-44 181.8 132 65.2
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.0e-42 177.6 136 61.8
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 2.2e-42 176.4 129 65.9
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 3.2e-41 172.6 139 62.6
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 1.3e-39 167.2 90 84.4
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 3.3e-38 162.5 131 59.5
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 5.7e-38 161.8 151 58.9
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 4.8e-37 158.7 135 57.8
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 6.3e-37 158.3 125 65.6
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 5.5e-33 145.2 133 55.6
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.3e-29 134.0 131 55.0
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.4e-28 130.6 201 42.3
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 7.9e-24 114.8 74 70.3
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 3.8e-18 95.9 112 48.2


User provided reference genes

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