Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.7e-211 738.4 380 100.0
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 3.6e-195 684.9 380 91.3
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 5.2e-194 681.0 380 91.8
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.7e-190 668.7 399 87.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.1e-162 577.0 380 75.8
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.2e-161 573.5 379 77.3
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.7e-160 568.5 380 75.0
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 6.4e-160 567.8 380 75.5
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.1e-159 567.0 380 74.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 3.2e-159 565.5 381 77.4
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 4.6e-158 561.6 380 72.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.5e-156 556.6 380 74.7
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 4.3e-156 555.1 380 73.9
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 5.6e-156 554.7 378 74.1
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 9.5e-156 553.9 380 74.2
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.1e-155 552.7 380 74.2
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 3.6e-155 552.0 408 69.6
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 4.7e-155 551.6 380 73.2
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 6.2e-155 551.2 381 74.3
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 8.1e-155 550.8 382 74.1
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 8.1e-155 550.8 380 73.9
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 8.1e-155 550.8 380 73.7
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 8.9e-154 547.4 380 73.7
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.2e-153 547.0 386 73.3
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.2e-153 547.0 380 72.6
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 4.4e-153 545.0 380 74.7
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.4e-153 545.0 384 72.7
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.3e-152 543.5 380 72.4
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.2e-152 542.7 384 72.1
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 2.9e-152 542.3 409 67.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 6.4e-152 541.2 403 68.2
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 6.4e-152 541.2 380 72.4
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.9e-151 539.7 380 72.9
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.4e-151 539.3 380 71.6
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 3.2e-151 538.9 380 73.9
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.2e-151 538.9 371 74.1
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 7.1e-151 537.7 392 73.0
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 3.5e-150 535.4 435 65.3
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 4.6e-150 535.0 380 70.5
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.0e-149 533.9 380 71.6
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 2.3e-149 532.7 380 71.8
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.0e-149 532.3 380 70.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 5.1e-149 531.6 380 71.1
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 5.1e-149 531.6 380 70.5
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 6.6e-149 531.2 380 71.1
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 6.6e-149 531.2 380 72.1
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 6.6e-149 531.2 378 73.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.7e-149 530.8 390 69.2
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.1e-148 530.4 380 72.1
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.1e-148 530.4 380 70.8
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.5e-148 530.0 380 71.6
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.5e-148 530.0 433 66.3
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 3.3e-148 528.9 378 71.2
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 2.1e-147 526.2 380 70.5
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.8e-147 525.8 380 70.8
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 3.6e-147 525.4 378 70.4
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 4.7e-147 525.0 384 69.3
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 6.2e-147 524.6 380 70.0
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.4e-146 523.5 380 69.7
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.8e-146 523.1 380 70.3
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-146 522.7 380 70.5
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 4.0e-146 521.9 378 69.8
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 4.4e-145 518.5 376 70.7
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 7.6e-145 517.7 380 69.2
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 9.9e-145 517.3 380 69.2
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 2.2e-144 516.2 380 67.9
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 2.9e-144 515.8 380 70.0
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 4.9e-144 515.0 381 68.2
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 4.9e-144 515.0 380 68.9
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 8.4e-144 514.2 357 73.9
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.1e-143 513.8 380 70.0
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.4e-143 513.5 363 73.3
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 1.4e-143 513.5 380 68.4
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 1.9e-143 513.1 385 68.3
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.9e-143 513.1 381 70.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.9e-143 513.1 381 69.3
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 4.2e-143 511.9 381 70.1
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 2.1e-142 509.6 381 69.6
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 3.5e-142 508.8 381 69.6
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 3.5e-142 508.8 381 69.6
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.3e-141 506.1 382 67.8
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.6e-139 500.0 386 67.1
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 4.8e-139 498.4 433 63.0
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 6.2e-139 498.0 382 66.8
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.8e-138 496.5 388 66.5
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.1e-138 495.7 411 64.0
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 3.1e-138 495.7 405 64.7
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 6.9e-138 494.6 380 66.3
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.7e-136 490.0 398 65.1
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-136 490.0 380 67.1
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.4e-135 486.1 381 65.6
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.9e-132 476.5 325 73.8
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 2.5e-132 476.1 460 56.1
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-130 469.5 380 66.1
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 7.1e-127 458.0 385 64.2
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.6e-126 456.8 382 61.5
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 1.0e-125 454.1 385 61.6
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 1.3e-123 447.2 332 68.1
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.5e-119 431.8 382 59.9
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 3.5e-118 429.1 276 81.2
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.6e-118 428.7 382 58.9
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 7.4e-116 421.4 388 59.3
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.2e-112 409.8 413 56.7
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 7.2e-111 404.8 277 75.1
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.4e-106 390.6 389 56.6
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 2.8e-75 286.6 245 62.4
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.3e-72 277.7 426 40.6
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.6e-62 243.0 158 75.9
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.0e-61 241.5 461 36.9
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.8e-61 238.8 161 73.9
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.9e-61 238.4 158 75.3
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 1.1e-50 204.9 342 38.3
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-48 198.0 161 64.0
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.1e-47 194.9 148 68.2
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 4.9e-43 179.5 140 60.7
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.6e-41 174.5 129 65.1
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.5e-39 167.2 126 65.9
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 4.8e-30 136.3 103 61.2
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 6.2e-30 136.0 109 67.0
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.1e-29 133.7 86 81.4
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.6e-25 121.3 95 67.4
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 3.9e-24 116.7 104 56.7
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 4.2e-10 70.1 39 89.7
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 7.1e-10 69.3 123 37.4
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 9.3e-10 68.9 39 87.2
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 6.2e-06 56.2 116 35.3


User provided reference genes

Program Settings