Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026420 Sechium edule HOM05D005131 ORTHO05D006645 4.1e-181 637.9 308 100.0
CsaV3_3G038080 Cucumis sativus L. HOM05D005131 ORTHO05D006645 1.2e-172 609.8 306 95.8
ClCG10G018240 Citrullus lanatus HOM05D005131 ORTHO05D006645 5.2e-168 594.3 306 94.1
CiPaw.10G018800 Carya illinoinensis HOM05D005131 ORTHO05D006645 7.2e-154 547.4 299 84.6
Nn2g14347 Nelumbo nucifera HOM05D005131 ORTHO05D006645 8.0e-153 543.9 300 85.7
Manes.08G034500 Manihot esculenta HOM05D005131 ORTHO05D006645 3.0e-152 542.0 299 81.9
QL07p027488 Quercus lobata HOM05D005131 ORTHO05D006645 4.0e-152 541.6 299 84.3
Potri.016G068400 Populus trichocarpa HOM05D005131 ORTHO05D006645 1.2e-151 540.0 299 83.6
PSO384G4687 Papaver somniferum HOM05D005131 ORTHO05D006645 2.0e-151 539.3 301 83.1
Cpa.g.sc104.11 Carica papaya HOM05D005131 ORTHO05D006645 2.6e-151 538.9 299 84.6
PSO339G6419 Papaver somniferum HOM05D005131 ORTHO05D006645 3.4e-151 538.5 301 83.1
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 5.7e-151 537.7 302 82.1
Ah.12g059320 Amaranthus hybridus HOM05D005131 ORTHO05D006645 9.8e-151 537.0 299 83.6
Lalb_Chr20g0111311 Lupinus albus HOM05D005131 ORTHO05D006645 9.8e-151 537.0 299 84.3
TWI74G0987 Tripterygium wilfordii HOM05D005131 ORTHO05D006645 9.8e-151 537.0 298 83.2
Atru.chr8.1330 Acer truncatum HOM05D005131 ORTHO05D006645 1.3e-150 536.6 299 83.6
Glyma.19G200600 Glycine max HOM05D005131 ORTHO05D006645 1.7e-150 536.2 299 83.6
Actinidia37756 Actinidia chinensis HOM05D005131 ORTHO05D006645 3.7e-150 535.0 302 81.5
Ciclev10012219m.g Citrus clementina HOM05D005131 ORTHO05D006645 3.7e-150 535.0 299 84.6
Duzib128G0735 Durio zibethinus HOM05D005131 ORTHO05D006645 6.3e-150 534.3 299 83.3
GSVIVG01022599001 Vitis vinifera HOM05D005131 ORTHO05D006645 6.3e-150 534.3 302 81.8
Haze_20155 Corylus avellana HOM05D005131 ORTHO05D006645 2.4e-149 532.3 297 84.5
Manes.09G044500 Manihot esculenta HOM05D005131 ORTHO05D006645 3.1e-149 531.9 296 82.8
Aa31LG10G7440 Aethionema arabicum HOM05D005131 ORTHO05D006645 4.1e-149 531.6 301 81.1
Lj1g0022682 Lotus japonicus HOM05D005131 ORTHO05D006645 7.0e-149 530.8 299 82.3
PGR004G1515 Punica granatum HOM05D005131 ORTHO05D006645 9.2e-149 530.4 301 82.7
CANSAT64G0057 Cannabis sativa HOM05D005131 ORTHO05D006645 1.2e-148 530.0 298 83.6
MD12G1041900 Malus domestica HOM05D005131 ORTHO05D006645 1.2e-148 530.0 299 83.9
VMungo1383G1979 Vigna mungo HOM05D005131 ORTHO05D006645 1.2e-148 530.0 300 82.7
Prupe.7G093300 Prunus persica HOM05D005131 ORTHO05D006645 1.6e-148 529.6 299 84.3
TPR.G31287 Trifolium pratense HOM05D005131 ORTHO05D006645 1.6e-148 529.6 299 83.3
MSTRG.5889 Avicennia marina HOM05D005131 ORTHO05D006645 4.5e-148 528.1 301 82.1
FvH4_6g20480 Fragaria vesca HOM05D005131 ORTHO05D006645 4.5e-148 528.1 299 81.9
FAN05G1272 Fragaria x ananassa HOM05D005131 ORTHO05D006645 4.5e-148 528.1 299 81.6
Gohir.D09G129600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 5.9e-148 527.7 299 81.9
Gorai.006G148500 Gossypium raimondii HOM05D005131 ORTHO05D006645 5.9e-148 527.7 299 81.9
FAN05G3424 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.0e-147 526.9 299 81.6
Sc22g0002890 Simmondsia chinensis HOM05D005131 ORTHO05D006645 1.0e-147 526.9 297 82.2
Phvul.001G196500 Phaseolus vulgaris HOM05D005131 ORTHO05D006645 1.3e-147 526.6 299 82.6
Sopen06g002230 Solanum pennellii HOM05D005131 ORTHO05D006645 1.3e-147 526.6 301 80.7
CSS0022283 Camellia sinensis var. sinensis HOM05D005131 ORTHO05D006645 2.3e-147 525.8 302 81.8
Solyc06g007310.4 Solanum lycopersicum HOM05D005131 ORTHO05D006645 2.9e-147 525.4 298 81.2
PGSC0003DMG401020557 Solanum tuberosum HOM05D005131 ORTHO05D006645 3.8e-147 525.0 301 80.7
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 5.0e-147 524.6 301 80.1
Medtr7g106430 Medicago truncatula HOM05D005131 ORTHO05D006645 6.6e-147 524.2 299 81.9
Cc06_g06690 Coffea canephora HOM05D005131 ORTHO05D006645 8.6e-147 523.9 299 80.6
Haze_20150 Corylus avellana HOM05D005131 ORTHO05D006645 8.6e-147 523.9 298 83.9
RcHm_v2.0_Chr3g0476361 Rosa chinensis HOM05D005131 ORTHO05D006645 1.5e-146 523.1 299 80.6
EL10Ac5g11853 Beta vulgaris HOM05D005131 ORTHO05D006645 1.9e-146 522.7 301 80.1
BcaB02g08573 Brassica carinata HOM05D005131 ORTHO05D006645 2.5e-146 522.3 301 81.4
Aqoxy2G00625 Aquilegia oxysepala HOM05D005131 ORTHO05D006645 5.6e-146 521.2 299 81.3
Carub.0005s1875 Capsella rubella HOM05D005131 ORTHO05D006645 5.6e-146 521.2 299 80.9
Gohir.A09G133400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 5.6e-146 521.2 299 80.9
AL5G33050 Arabidopsis lyrata HOM05D005131 ORTHO05D006645 9.5e-146 520.4 299 81.3
BcaC02g09261 Brassica carinata HOM05D005131 ORTHO05D006645 1.2e-145 520.0 299 81.6
DCAR_009180 Daucus carota HOM05D005131 ORTHO05D006645 2.1e-145 519.2 301 81.1
Migut.J00690 Erythranthe guttata HOM05D005131 ORTHO05D006645 3.6e-145 518.5 298 80.2
AT3G52390 Arabidopsis thaliana HOM05D005131 ORTHO05D006645 8.0e-145 517.3 299 80.3
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 8.0e-145 517.3 300 81.0
Eucgr.A02573 Eucalyptus grandis HOM05D005131 ORTHO05D006645 1.8e-144 516.2 300 80.3
Sp5g09900 Schrenkiella parvula HOM05D005131 ORTHO05D006645 1.8e-144 516.2 299 81.3
Thhalv10010578m.g Eutrema salsugineum HOM05D005131 ORTHO05D006645 3.0e-144 515.4 299 80.6
Hund10854 Selenicereus undatus HOM05D005131 ORTHO05D006645 3.0e-144 515.4 301 79.7
Thecc.05G106400 Theobroma cacao HOM05D005131 ORTHO05D006645 4.0e-144 515.0 299 82.3
AUR62030719 Chenopodium quinoa HOM05D005131 ORTHO05D006645 5.2e-144 514.6 301 80.4
BraA04t16401Z Brassica rapa HOM05D005131 ORTHO05D006645 6.8e-144 514.2 307 79.5
CARHR162160 Cardamine hirsuta HOM05D005131 ORTHO05D006645 8.9e-144 513.8 299 80.3
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 1.5e-143 513.1 301 78.4
C04p40630 Brassica napus HOM05D005131 ORTHO05D006645 2.0e-143 512.7 307 79.5
BolC4t25644H Brassica oleracea HOM05D005131 ORTHO05D006645 2.0e-143 512.7 307 79.5
A04p07040 Brassica napus HOM05D005131 ORTHO05D006645 2.6e-143 512.3 307 79.2
THA.LOC104803758 Tarenaya hassleriana HOM05D005131 ORTHO05D006645 4.4e-143 511.5 299 80.3
Hund14967 Selenicereus undatus HOM05D005131 ORTHO05D006645 5.8e-143 511.1 299 80.3
Lsat_1_v5_gn_6_33480 Lactuca sativa HOM05D005131 ORTHO05D006645 2.2e-142 509.2 301 77.7
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 9.2e-141 503.8 282 83.7
Os07g0158200 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 1.2e-140 503.4 308 77.9
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 1.7e-139 499.6 356 69.4
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 3.3e-138 495.4 297 79.1
Rhsim03G0063800 Rhododendron simsii HOM05D005131 ORTHO05D006645 8.0e-137 490.7 306 76.5
FAN14G5766 Fragaria x ananassa HOM05D005131 ORTHO05D006645 4.1e-133 478.4 304 75.7
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 4.6e-132 474.9 306 74.2
TAR636G0548 Trochodendron aralioides HOM05D005131 ORTHO05D006645 6.0e-132 474.6 268 83.2
SHI18412 Sapria himalayana HOM05D005131 ORTHO05D006645 1.3e-131 473.4 297 71.7
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea HOM05D005131 ORTHO05D006645 7.3e-130 467.6 292 76.7
ATR0697G267 Amborella trichopoda HOM05D005131 ORTHO05D006645 6.2e-129 464.5 281 74.4
CAN.G869.8 Capsicum annuum HOM05D005131 ORTHO05D006645 1.1e-128 463.8 265 80.4
Dinv12349 Davidia involucrata HOM05D005131 ORTHO05D006645 1.2e-127 460.3 247 84.2
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 1.2e-127 460.3 298 70.1
Gohir.A09G012800 Gossypium hirsutum HOM05D005131 ORTHO05D006645 6.4e-126 454.5 253 82.2
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea HOM05D005131 ORTHO05D006645 1.6e-124 449.9 269 79.2
Gohir.A13G054600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 2.7e-124 449.1 253 81.8
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 1.0e-123 447.2 300 68.7
FAN02G0570 Fragaria x ananassa HOM05D005131 ORTHO05D006645 3.0e-123 445.7 254 81.1
Gohir.A05G372400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.9e-122 443.0 253 81.4
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla HOM05D005131 ORTHO05D006645 4.3e-122 441.8 301 71.1
Oeu035639.1 Olea europaea HOM05D005131 ORTHO05D006645 9.5e-122 440.7 254 80.3
Peaxi162Scf00012g02523 Petunia axillaris HOM05D005131 ORTHO05D006645 4.0e-120 435.3 301 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2339 Anthoceros agrestis HOM05D005131 ORTHO05D006645 1.6e-116 423.3 282 68.4
unitig_26.g9145 Utricularia gibba HOM05D005131 ORTHO05D006645 6.0e-116 421.4 258 78.7
SMO334G0001 Selaginella moellendorffii HOM05D005131 ORTHO05D006645 1.2e-113 413.7 282 66.7
CAN.G741.26 Capsicum annuum HOM05D005131 ORTHO05D006645 2.8e-113 412.5 276 72.5
Nitab4.5_0000121g0080 Nicotiana tabacum HOM05D005131 ORTHO05D006645 4.0e-112 408.7 299 68.6
AUR62036353 Chenopodium quinoa HOM05D005131 ORTHO05D006645 1.4e-109 400.2 234 79.5
MSTRG.18896 Avicennia marina HOM05D005131 ORTHO05D006645 1.8e-104 383.3 218 81.7
Pp3c11_16390 Physcomitrium patens HOM05D005131 ORTHO05D006645 5.1e-99 365.2 300 58.3
CBR_g41666 Chara braunii HOM05D005131 ORTHO05D006645 5.3e-96 355.1 301 57.8
MBI12_g38626_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 9.9e-95 350.9 206 79.6
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 5.1e-91 338.6 293 56.7
MELO3C009548.2 Cucumis melo HOM05D000492 ORTHO05D000499 1.6e-84 317.0 154 97.4
MCO14G398 Micromonas commoda HOM05D005131 ORTHO05D006645 1.3e-83 313.9 314 51.3
HPP92_012180 Vanilla planifolia HOM05D005131 ORTHO05D006645 3.8e-78 295.8 204 68.1
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 1.1e-77 294.3 288 48.6
MELO3C031004.2 Cucumis melo HOM05D005131 ORTHO05D006645 3.6e-76 289.3 145 95.9
HPP92_013927 Vanilla planifolia HOM05D005131 ORTHO05D006645 2.0e-74 283.5 188 70.7
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 1.2e-71 274.2 287 50.2
HPP92_026830 Vanilla planifolia HOM05D005131 ORTHO05D006645 3.3e-66 256.1 165 72.7
CDE09G0133 Ceratophyllum demersum HOM05D005131 ORTHO05D006645 2.1e-60 236.9 154 74.0
Lj7A140G6 Lonicera japonica HOM05D005131 ORTHO05D006645 1.8e-59 233.8 182 64.8
Zm00001eb419840 Zea mays HOM05D005131 ORTHO05D006645 1.8e-59 233.8 184 63.0
Sabra16G0069400 Salix brachista HOM05D005131 ORTHO05D006645 4.7e-52 209.1 123 77.2
HPP92_013928 Vanilla planifolia HOM05D005131 ORTHO05D006645 1.0e-51 208.0 117 81.2
Psat3g205680 Pisum sativum HOM05D005131 ORTHO05D006645 1.2e-50 204.5 115 80.9
Zm00001eb002330 Zea mays HOM05D005131 ORTHO05D006645 5.7e-50 202.2 133 72.2
Cc04_g12370 Coffea canephora HOM05D005131 ORTHO05D006645 1.0e-46 191.4 108 81.5
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 8.0e-44 181.8 124 70.2
arahy.Tifrunner.gnm1.ann1.Y0MH84 Arachis hypogaea HOM05D005131 ORTHO05D006645 6.3e-41 172.2 172 54.7
MBI12_g38628_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 2.4e-40 170.2 97 84.5
Zm00001eb083350 Zea mays HOM05D005131 ORTHO05D006645 9.1e-40 168.3 118 67.8
Zm00001eb324820 Zea mays HOM05D005131 ORTHO05D006645 7.2e-37 158.7 105 70.5
Os08g0165800 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 1.1e-32 144.8 318 34.0
Psat0s6170g0080 Pisum sativum HOM05D005131 ORTHO05D006645 5.9e-31 139.0 95 75.8
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 2.9e-30 136.7 296 33.8
HPP92_012178 Vanilla planifolia HOM05D005131 ORTHO05D006645 4.1e-24 116.3 93 61.3
MD14G1041100 Malus domestica HOM05D005131 ORTHO05D006645 1.2e-20 104.8 301 30.2
Zm00001eb429030 Zea mays HOM05D005131 ORTHO05D006645 3.6e-20 103.2 69 68.1
Zm00001eb324830 Zea mays HOM05D005131 ORTHO05D006645 1.1e-19 101.7 69 68.1
Os07g0157900 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 4.4e-18 96.3 106 52.8
Pp3c7_11890 Physcomitrium patens HOM05D005131 ORTHO05D006645 1.6e-15 87.8 93 49.5
Psat3g205720 Pisum sativum HOM05D005131 ORTHO05D006645 4.6e-15 86.3 55 76.4
MCO10G056 Micromonas commoda HOM05D005131 ORTHO05D006645 1.0e-14 85.1 165 31.5
Zm00001eb392810 Zea mays HOM05D005131 ORTHO05D006645 1.9e-13 80.9 55 67.3
Cc02_g14730 Coffea canephora HOM05D004773 ORTHO05D005943 6.2e-12 75.9 273 26.4
A01p30550 Brassica napus HOM05D005131 ORTHO05D033215 1.8e-11 74.3 42 81.0
BraA01t03187Z Brassica rapa HOM05D005131 ORTHO05D033215 1.8e-11 74.3 42 81.0
TAR633G0521 Trochodendron aralioides HOM05D005131 ORTHO05D006645 1.8e-11 74.3 49 67.3
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 2.3e-11 73.9 272 27.2
BolC1t02473H Brassica oleracea HOM05D005131 ORTHO05D033215 2.6e-10 70.5 39 82.1
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.4e-08 63.9 208 27.4
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 3.2e-08 63.5 204 28.9
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.2e-08 63.5 207 28.0
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.2e-08 63.5 207 28.0
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 7.1e-08 62.4 208 27.9
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.2e-08 62.0 207 27.5
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 9.2e-08 62.0 173 29.5
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 1.2e-07 61.6 208 27.4
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 1.2e-07 61.6 199 27.6
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.1e-07 60.8 208 27.9
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.1e-07 60.8 208 27.9
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 3.5e-07 60.1 199 28.6
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 4.6e-07 59.7 135 32.6
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-06 58.5 136 33.1
CAN.G1767.1 Capsicum annuum HOM05D000162 ORTHO05D000090 1.7e-06 57.8 78 43.6
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.7e-06 57.8 132 33.3
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.3e-06 57.4 136 32.4
FvH4_2g19461 Fragaria vesca HOM05D005131 ORTHO05D006645 5.1e-06 56.2 57 49.1


User provided reference genes

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