Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 4.0e-72 274.6 136 100.0
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 5.8e-63 244.2 138 88.4
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.7e-59 232.6 168 72.0
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 3.6e-57 224.9 162 75.3
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 3.3e-50 201.8 132 72.7
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.1e-48 196.8 131 72.5
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.4e-48 196.4 131 72.5
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 2.6e-47 192.2 131 71.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.5e-47 191.4 126 76.2
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 4.5e-47 191.4 126 76.2
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 5.8e-47 191.0 121 76.0
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.7e-46 189.5 131 67.9
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.7e-46 189.5 132 72.0
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.2e-46 189.1 131 68.7
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 4.9e-46 188.0 131 71.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 6.4e-46 187.6 125 73.6
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 8.4e-46 187.2 98 86.7
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 8.4e-46 187.2 126 74.6
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 4.2e-45 184.9 130 68.5
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 5.4e-45 184.5 105 81.9
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 5.4e-45 184.5 132 72.0
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.6e-44 183.0 126 71.4
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.1e-44 182.6 132 68.2
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 2.7e-44 182.2 132 66.7
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.7e-44 182.2 142 63.4
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.7e-44 182.2 126 70.6
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.7e-44 182.2 105 81.0
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.5e-44 181.8 120 74.2
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.6e-44 181.4 101 85.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.6e-44 181.4 134 66.4
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 6.0e-44 181.0 123 70.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 6.0e-44 181.0 134 66.4
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 7.9e-44 180.6 101 85.1
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.0e-43 180.3 129 68.2
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.3e-43 179.1 126 69.0
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 3.0e-43 178.7 132 65.9
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 3.0e-43 178.7 108 76.9
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.0e-43 178.7 103 78.6
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.9e-43 178.3 137 67.2
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.9e-43 178.3 121 71.1
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 5.1e-43 177.9 115 73.0
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.1e-42 176.8 116 70.7
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.1e-42 176.8 123 69.1
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 1.5e-42 176.4 119 71.4
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.9e-42 176.0 103 77.7
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.3e-42 175.3 100 81.0
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 4.3e-42 174.9 117 70.1
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 7.4e-42 174.1 132 63.6
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 7.4e-42 174.1 123 69.1
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 9.6e-42 173.7 102 78.4
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.3e-41 173.3 121 71.1
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.3e-41 173.3 123 69.1
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.6e-41 172.9 125 68.8
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.6e-41 172.9 125 68.8
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.6e-41 172.9 125 68.8
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.6e-41 172.9 102 79.4
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.6e-41 172.9 129 66.7
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.1e-41 172.6 128 65.6
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 2.1e-41 172.6 125 68.8
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 3.7e-41 171.8 120 69.2
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 4.8e-41 171.4 140 62.1
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 4.8e-41 171.4 111 72.1
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 6.2e-41 171.0 119 70.6
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.2e-41 171.0 97 81.4
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 8.1e-41 170.6 98 78.6
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 2.4e-40 169.1 125 64.8
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.0e-40 168.3 110 73.6
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 6.9e-40 167.5 119 69.7
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 9.0e-40 167.2 109 70.6
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 9.0e-40 167.2 111 69.4
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.2e-39 166.8 114 67.5
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.2e-39 166.8 111 69.4
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 1.5e-39 166.4 122 64.8
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.5e-39 166.4 108 71.3
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 2.0e-39 166.0 128 64.8
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 2.0e-39 166.0 104 73.1
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.6e-39 165.6 129 64.3
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 4.5e-39 164.9 101 74.3
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 7.6e-39 164.1 116 70.7
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 7.6e-39 164.1 129 62.8
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 7.6e-39 164.1 105 73.3
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 9.9e-39 163.7 131 60.3
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.3e-38 163.3 129 62.8
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.2e-38 162.5 132 62.1
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 2.9e-38 162.2 105 69.5
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.9e-38 162.2 129 61.2
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.9e-38 162.2 102 68.6
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 2.9e-38 162.2 99 77.8
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.9e-38 161.4 110 69.1
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 6.4e-38 161.0 129 62.0
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 8.4e-38 160.6 130 63.8
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.1e-37 160.2 110 69.1
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.9e-37 159.5 103 72.8
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.4e-37 159.1 113 62.8
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 4.2e-37 158.3 129 56.6
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.3e-35 153.3 106 62.3
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.3e-35 152.5 106 69.8
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 3.0e-35 152.1 105 62.9
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.1e-34 150.2 129 59.7
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 2.1e-33 146.0 192 45.8
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.8e-32 142.9 171 47.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-31 140.2 89 75.3
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-31 140.2 89 75.3
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 7.6e-31 137.5 84 73.8
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 3.8e-30 135.2 82 76.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.9e-29 132.9 68 94.1
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 9.3e-29 130.6 103 62.1
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 6.7e-27 124.4 90 65.6
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 8.7e-27 124.0 72 80.6
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 8.7e-27 124.0 85 71.8
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.1e-26 123.6 104 54.8
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.1e-24 115.5 63 85.7
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 2.9e-22 109.0 69 71.0
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.1e-21 107.1 66 72.7
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.4e-21 106.7 108 50.9
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 4.2e-21 105.1 82 64.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 4.3e-18 95.1 95 53.7
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 2.8e-17 92.4 101 45.5
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.4e-16 89.4 99 40.4
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 9.1e-16 87.4 66 63.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 3.4e-15 85.5 100 40.0
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 6.5e-14 81.3 91 37.4
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.4e-13 80.1 57 66.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.8e-11 70.9 89 41.6
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 4.4e-10 68.6 38 81.6


User provided reference genes

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