Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 9.9e-101 370.2 193 100.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.7e-82 308.9 211 79.6
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 2.5e-80 302.4 210 80.0
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.3e-79 300.1 182 87.4
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.0e-49 200.7 178 61.8
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.0e-49 200.7 183 62.3
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.8e-49 199.9 184 60.9
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 3.0e-49 199.1 178 61.8
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.8e-47 192.6 178 61.2
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 2.8e-47 192.6 185 60.0
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 4.8e-47 191.8 181 58.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.1e-46 190.7 185 57.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.8e-46 189.9 190 58.9
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 3.1e-46 189.1 168 61.9
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 3.1e-46 189.1 168 61.9
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 3.1e-46 189.1 168 61.9
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 3.1e-46 189.1 126 77.0
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 5.3e-46 188.3 132 75.0
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 7.0e-46 188.0 163 63.8
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.2e-45 187.2 115 84.3
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 2.0e-45 186.4 178 57.9
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.0e-45 186.4 176 59.7
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.7e-45 186.0 163 60.7
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 3.5e-45 185.7 173 59.5
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 5.9e-45 184.9 186 55.4
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 5.9e-45 184.9 180 60.0
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 7.7e-45 184.5 187 56.1
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 7.7e-45 184.5 175 60.6
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 7.7e-45 184.5 174 59.8
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 7.7e-45 184.5 126 73.8
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.0e-44 184.1 132 72.0
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.0e-44 184.1 180 59.4
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.7e-44 183.3 175 60.0
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.2e-44 183.0 187 57.8
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 2.9e-44 182.6 118 76.3
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.9e-44 182.6 189 56.1
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 3.8e-44 182.2 154 64.9
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 5.0e-44 181.8 114 79.8
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 5.0e-44 181.8 185 57.3
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 6.5e-44 181.4 126 73.8
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.5e-44 181.4 125 74.4
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 6.5e-44 181.4 171 61.4
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 8.5e-44 181.0 138 68.1
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 8.5e-44 181.0 136 70.6
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.1e-43 180.6 164 62.8
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.1e-43 180.6 181 56.9
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.1e-43 180.6 187 55.1
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.9e-43 179.9 162 63.6
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 2.5e-43 179.5 144 66.0
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.2e-43 179.1 156 64.7
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.2e-43 179.1 190 54.2
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 4.2e-43 178.7 111 78.4
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 4.2e-43 178.7 112 80.4
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 7.2e-43 177.9 175 57.1
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 7.2e-43 177.9 175 57.1
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 9.4e-43 177.6 118 74.6
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.1e-42 176.4 183 50.8
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 2.1e-42 176.4 104 84.6
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 2.7e-42 176.0 117 76.1
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 3.6e-42 175.6 162 61.7
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 6.1e-42 174.9 117 75.2
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 6.1e-42 174.9 187 55.6
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 6.1e-42 174.9 117 76.1
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 8.0e-42 174.5 104 82.7
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 1.8e-41 173.3 175 57.7
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.8e-41 173.3 174 55.7
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.3e-41 172.9 102 81.4
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 2.3e-41 172.9 109 78.0
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 2.3e-41 172.9 113 77.9
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.3e-41 172.9 104 82.7
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 5.2e-41 171.8 109 78.0
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 5.2e-41 171.8 109 78.0
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.8e-41 171.4 187 55.1
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 6.8e-41 171.4 107 79.4
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 8.8e-41 171.0 111 77.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 8.8e-41 171.0 105 78.1
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.2e-40 170.6 104 80.8
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.5e-40 170.2 119 72.3
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 2.0e-40 169.9 114 74.6
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 2.0e-40 169.9 139 66.2
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 2.0e-40 169.9 114 74.6
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 2.0e-40 169.9 114 74.6
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 2.6e-40 169.5 114 74.6
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 3.4e-40 169.1 125 69.6
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 4.4e-40 168.7 114 74.6
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 5.7e-40 168.3 136 65.4
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 7.5e-40 167.9 128 65.6
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.3e-39 167.2 123 68.3
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 2.2e-39 166.4 100 83.0
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 3.7e-39 165.6 140 65.0
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.7e-39 165.6 117 70.1
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.1e-38 164.1 179 52.5
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.1e-38 164.1 114 70.2
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.4e-38 163.7 156 60.3
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.4e-38 163.7 143 59.4
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.4e-38 162.9 113 69.9
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.4e-38 162.9 149 57.7
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 3.1e-38 162.5 183 55.2
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 3.5e-37 159.1 101 78.2
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.5e-35 152.9 101 74.3
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.3e-35 152.5 113 67.3
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.2e-33 145.2 160 53.1
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 5.2e-33 145.2 126 59.5
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 2.6e-32 142.9 135 58.5
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 7.5e-32 141.4 154 51.9
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 3.2e-30 136.0 119 57.1
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.7e-28 130.2 88 72.7
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.2e-26 124.0 70 82.9
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 1.2e-24 117.5 63 90.5
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.5e-24 117.1 74 77.0
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.6e-21 107.1 190 36.8
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.1e-17 94.4 55 83.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.8e-17 93.6 63 76.2
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 3.7e-15 85.9 77 51.9
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 9.2e-14 81.3 44 81.8
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.7e-10 68.9 44 70.5
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.1e-09 67.8 55 56.4


User provided reference genes

Program Settings