Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 5.9e-200 700.7 355 100.0
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 1.7e-159 566.2 350 83.4
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 9.5e-158 560.5 356 81.7
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 1.2e-139 500.4 367 74.7
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 1.6e-80 303.9 364 49.7
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 6.5e-74 282.0 368 48.1
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 2.5e-73 280.0 395 46.8
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 1.2e-72 277.7 406 44.3
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 3.7e-69 266.2 407 44.5
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.4e-68 263.5 396 46.0
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.0e-66 258.1 370 45.1
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 8.6e-66 255.0 399 42.9
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 9.5e-65 251.5 396 44.9
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.8e-64 250.0 402 41.3
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 6.1e-64 248.8 415 40.5
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 8.0e-64 248.4 400 43.5
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 4.0e-63 246.1 369 43.9
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.6e-62 243.4 393 44.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 7.5e-62 241.9 411 40.4
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 9.8e-62 241.5 370 42.2
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.2e-61 240.4 399 43.1
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 2.2e-61 240.4 406 38.4
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 4.9e-61 239.2 376 43.9
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 2.4e-60 236.9 351 43.6
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.6e-59 234.2 339 44.0
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 6.6e-58 228.8 383 41.8
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.6e-58 228.4 371 42.3
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 5.6e-57 225.7 371 42.0
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.2e-56 224.6 371 42.0
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 4.7e-56 222.6 406 40.1
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.8e-55 220.7 376 41.2
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.9e-55 218.4 365 41.4
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.4e-54 216.5 347 40.9
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 5.8e-54 215.7 389 39.6
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 5.8e-54 215.7 472 36.0
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.9e-53 213.4 371 39.1
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 4.1e-52 209.5 397 39.3
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 9.2e-52 208.4 390 36.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 9.2e-52 208.4 408 39.7
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 5.0e-50 202.6 386 37.3
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.1e-49 201.4 373 38.6
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 7.3e-49 198.7 373 38.3
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 4.7e-48 196.1 286 41.6
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 3.1e-47 193.4 324 38.3
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 3.1e-47 193.4 386 36.8
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 4.0e-47 193.0 415 35.2
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 5.2e-47 192.6 374 35.8
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.5e-46 191.0 315 40.6
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 2.0e-46 190.7 382 36.4
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 9.8e-46 188.3 231 48.1
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.7e-45 187.6 316 39.2
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.7e-45 187.6 374 35.3
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.1e-44 184.9 243 48.1
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.1e-44 183.0 368 38.6
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 4.1e-44 183.0 403 35.2
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.2e-43 181.4 327 40.4
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.1e-43 180.6 396 38.1
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 3.5e-43 179.9 365 35.3
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 4.3e-41 172.9 280 38.6
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.2e-40 171.4 384 35.9
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.8e-40 170.2 340 35.9
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 3.6e-40 169.9 332 38.0
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.1e-39 168.3 159 56.0
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 4.0e-39 166.4 353 35.1
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 8.9e-39 165.2 287 39.0
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 1.2e-38 164.9 267 41.2
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.1e-36 158.3 368 32.9
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.2e-35 154.8 124 57.3
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.2e-35 154.8 386 30.6
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.6e-35 154.5 318 35.2
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 3.5e-35 153.3 300 35.3
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 2.3e-34 150.6 440 30.5
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.6e-34 148.7 132 59.8
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.2e-32 144.8 93 74.2
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 2.1e-32 144.1 304 36.5
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 3.6e-32 143.3 438 32.4
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 3.6e-32 143.3 261 38.7
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 8.9e-31 138.7 311 33.4
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 4.4e-30 136.3 335 33.4
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 1.7e-26 124.4 149 49.7
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 8.7e-26 122.1 129 47.3
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 1.9e-25 120.9 312 31.7
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 9.9e-22 108.6 307 31.9
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.4e-20 102.8 345 30.4
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 3.6e-16 90.1 277 28.5
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 5.8e-14 82.8 125 40.0
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 9.9e-14 82.0 223 30.5
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 6.0e-11 72.8 173 30.6
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.3e-10 71.6 136 40.4
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.9e-10 70.1 67 46.3
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 1.3e-08 65.1 56 60.7
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 5.3e-07 59.7 174 32.2
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 9.0e-07 58.9 51 54.9
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 1.0e-05 55.5 50 38.0


User provided reference genes

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