Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 1.4e-88 329.7 177 100.0
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 4.3e-74 281.6 177 81.9
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 8.0e-73 277.3 177 81.9
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 8.3e-70 267.3 180 80.6
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.2e-54 216.1 174 66.1
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 4.9e-54 214.9 172 66.3
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 4.9e-54 214.9 174 66.1
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 8.3e-54 214.2 168 67.9
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 8.3e-54 214.2 172 65.7
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.4e-53 213.4 169 68.6
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.9e-53 213.0 169 68.6
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 5.4e-53 211.5 176 68.8
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 5.4e-53 211.5 169 68.0
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 7.1e-53 211.1 121 86.0
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 9.2e-53 210.7 120 83.3
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 1.2e-52 210.3 120 82.5
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.6e-52 209.9 121 84.3
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 1.6e-52 209.9 172 64.0
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 1.6e-52 209.9 121 86.0
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.7e-52 209.1 172 62.2
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.7e-52 209.1 177 62.1
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 3.5e-52 208.8 175 65.1
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 6.0e-52 208.0 121 81.0
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 6.0e-52 208.0 176 64.2
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 6.0e-52 208.0 140 75.0
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 7.8e-52 207.6 165 64.8
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.0e-51 207.2 174 64.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.7e-51 206.5 175 64.0
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.7e-51 206.5 175 64.0
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 1.7e-51 206.5 173 64.7
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 1.7e-51 206.5 121 83.5
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.3e-51 206.1 121 81.8
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 3.0e-51 205.7 121 79.3
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 3.0e-51 205.7 121 82.6
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 3.9e-51 205.3 178 61.8
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 3.9e-51 205.3 119 84.0
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 3.9e-51 205.3 121 78.5
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 3.9e-51 205.3 167 65.3
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 6.6e-51 204.5 169 63.9
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 1.1e-50 203.8 174 62.1
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 1.5e-50 203.4 174 62.1
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 1.5e-50 203.4 173 65.3
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.9e-50 203.0 121 82.6
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 2.5e-50 202.6 148 69.6
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 3.3e-50 202.2 121 77.7
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 4.3e-50 201.8 121 76.9
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 4.3e-50 201.8 121 76.9
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 4.3e-50 201.8 121 76.9
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 4.3e-50 201.8 121 76.9
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 4.3e-50 201.8 173 62.4
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 5.6e-50 201.4 119 77.3
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 5.6e-50 201.4 163 63.2
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 5.6e-50 201.4 174 61.5
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 9.6e-50 200.7 121 77.7
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 9.6e-50 200.7 121 77.7
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 9.6e-50 200.7 121 77.7
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 1.2e-49 200.3 121 79.3
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 1.2e-49 200.3 121 79.3
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 1.2e-49 200.3 121 76.0
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.2e-49 200.3 172 62.2
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 1.6e-49 199.9 149 68.5
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 2.1e-49 199.5 121 79.3
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 2.8e-49 199.1 120 76.7
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 2.8e-49 199.1 120 76.7
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 2.8e-49 199.1 171 62.0
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 3.6e-49 198.7 121 79.3
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 3.6e-49 198.7 119 80.7
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 4.7e-49 198.4 170 62.4
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 6.2e-49 198.0 121 78.5
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 6.2e-49 198.0 170 62.9
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 1.1e-48 197.2 119 78.2
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.4e-48 196.8 121 78.5
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.8e-48 196.4 141 66.7
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.8e-48 196.4 175 61.7
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 3.1e-48 195.7 121 76.9
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 3.1e-48 195.7 121 78.5
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 3.1e-48 195.7 119 79.0
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 3.1e-48 195.7 119 79.0
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 4.0e-48 195.3 172 61.0
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 4.0e-48 195.3 145 68.3
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 8.9e-48 194.1 171 60.8
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 2.6e-47 192.6 119 77.3
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 3.4e-47 192.2 144 69.4
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 4.4e-47 191.8 119 77.3
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 5.8e-47 191.4 119 75.6
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 9.9e-47 190.7 175 60.6
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 2.9e-46 189.1 121 75.2
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 2.9e-46 189.1 171 59.6
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 8.4e-46 187.6 137 70.1
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.4e-45 186.8 132 72.0
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 4.2e-45 185.3 126 69.0
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 9.3e-45 184.1 170 58.8
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 3.5e-44 182.2 115 74.8
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 8.7e-43 177.6 121 70.2
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 1.5e-42 176.8 162 63.0
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 7.3e-42 174.5 171 57.9
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 9.6e-42 174.1 172 58.7
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 3.1e-40 169.1 108 75.0
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 6.9e-40 167.9 165 61.8
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.5e-39 166.8 120 68.3
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.1e-34 150.6 143 58.0
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 1.1e-34 150.6 143 58.0
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 4.8e-33 145.2 159 51.6
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.1e-32 142.5 96 71.9
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.3e-32 141.7 113 64.6
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 4.5e-23 112.1 108 59.3
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 7.6e-23 111.3 114 55.3
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 1.7e-22 110.2 58 84.5
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 4.9e-22 108.6 79 67.1
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 2.7e-20 102.8 98 60.2
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 3.3e-18 95.9 98 54.1
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 4.8e-17 92.0 109 52.3
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 2.2e-06 56.6 37 73.0
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 8.5e-06 54.7 59 50.8


User provided reference genes

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