Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 0.0e+00 1815.8 890 100.0
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 0.0e+00 1560.4 888 86.0
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 0.0e+00 1531.9 886 84.3
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 0.0e+00 1511.1 985 76.9
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 0.0e+00 1193.7 886 66.5
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 0.0e+00 1187.2 890 66.2
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 0.0e+00 1170.6 886 64.0
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 0.0e+00 1167.9 880 65.2
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 0.0e+00 1156.4 887 64.9
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1154.8 887 64.8
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 0.0e+00 1151.7 890 64.0
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 0.0e+00 1146.0 890 63.7
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1146.0 887 64.0
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 0.0e+00 1144.8 912 63.0
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 0.0e+00 1143.6 891 62.6
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 0.0e+00 1143.3 865 64.6
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 0.0e+00 1137.9 884 63.8
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 0.0e+00 1132.5 867 65.3
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 0.0e+00 1130.2 888 63.5
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 0.0e+00 1127.9 889 62.1
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 0.0e+00 1111.7 904 62.4
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 0.0e+00 1107.0 896 62.4
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1101.7 888 62.2
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 0.0e+00 1094.3 912 61.5
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 0.0e+00 1094.0 890 60.7
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1091.6 896 61.7
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 0.0e+00 1090.1 886 60.8
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 0.0e+00 1087.0 890 61.5
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 0.0e+00 1083.2 882 61.5
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1082.4 892 61.9
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 0.0e+00 1082.4 881 61.4
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1078.2 892 61.4
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 6.1e-312 1073.5 883 60.8
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 1.2e-311 1072.8 872 61.2
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 4.6e-310 1067.8 860 60.0
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 6.6e-309 1063.9 889 60.3
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 1.1e-308 1063.1 882 60.4
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 1.9e-308 1062.4 852 60.6
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 3.1e-306 1055.0 904 58.7
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 5.8e-305 1050.8 906 57.7
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 5.8e-305 1050.8 843 61.3
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 8.4e-304 1047.0 904 57.9
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 5.6e-300 1034.2 896 58.0
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 1.6e-299 1032.7 872 59.4
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 3.4e-297 1025.0 892 57.5
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 1.0e-296 1023.5 887 57.7
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.9e-292 1009.2 894 58.9
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 1.9e-292 1009.2 884 57.2
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 4.8e-283 978.0 884 56.2
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 2.0e-281 972.6 794 61.1
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 3.4e-281 971.8 866 56.6
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 3.4e-281 971.8 915 54.4
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 7.7e-281 970.7 890 55.7
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 8.5e-280 967.2 882 57.1
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 2.0e-268 929.5 783 60.5
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 3.3e-268 928.7 880 53.8
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 1.8e-266 922.9 867 54.4
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 2.5e-263 912.5 783 59.5
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 5.2e-261 904.8 898 51.2
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 8.3e-251 870.9 975 47.7
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.4e-250 870.2 929 49.8
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 9.5e-247 857.4 833 54.0
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 2.0e-241 839.7 758 55.5
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 1.3e-211 740.7 922 44.0
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 2.4e-205 719.9 582 60.5
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.6e-204 716.5 674 55.9
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 2.7e-193 679.9 581 58.0
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 2.8e-182 643.3 865 41.2
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 1.9e-175 620.5 894 39.0
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 2.4e-173 613.6 481 62.2
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 1.3e-166 591.3 495 59.6
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 1.1e-159 568.2 515 58.1
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.9e-154 550.8 464 59.3
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 8.2e-142 508.8 424 59.2
QL07p038322 Quercus lobata HOM05D007235 ORTHO05D008985 7.8e-116 422.5 351 59.5
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 2.3e-115 421.0 378 56.6
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 4.1e-109 400.2 283 69.6
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 2.3e-104 384.4 279 66.7
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 8.6e-99 365.9 347 54.5
COL.COLO4_29681 Corchorus olitorius HOM05D007235 ORTHO05D008985 1.2e-92 345.5 315 54.9
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 2.7e-92 344.4 235 69.8
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 6.4e-86 323.2 251 63.7
MBI17_g48244_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 4.6e-84 317.0 353 48.7
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 3.6e-81 307.4 213 67.1
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 9.0e-80 302.8 203 69.0
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 1.2e-79 302.4 233 63.1
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 6.7e-51 206.8 139 74.1
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 9.7e-50 203.0 149 62.4
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 1.2e-44 186.0 129 69.8
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 9.8e-18 96.7 785 20.9
RcHm_v2.0_Chr3g0474631 Rosa chinensis HOM05D007235 ORTHO05D008985 2.2e-17 95.5 58 79.3
MD14G1029500 Malus domestica HOM05D007235 ORTHO05D008985 2.0e-15 89.0 61 70.5
Nn3g19722 Nelumbo nucifera HOM05D001324 ORTHO05D001220 6.6e-06 57.4 82 34.1
Oeu064642.2 Olea europaea HOM05D001324 ORTHO05D001220 8.6e-06 57.0 77 35.1


User provided reference genes

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