Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.2e-211 739.6 387 100.0
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.0e-173 613.6 401 85.3
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.0e-165 587.0 404 82.4
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 7.7e-161 570.9 407 77.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 4.0e-149 531.9 436 71.3
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 1.6e-137 493.4 345 78.0
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.2e-121 440.7 411 61.6
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 4.6e-121 438.7 410 61.0
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.0e-120 436.0 417 60.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 4.3e-119 432.2 415 60.5
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.2e-118 430.6 414 60.4
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.6e-118 429.1 418 60.0
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 6.2e-118 428.3 403 60.5
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 1.1e-117 427.6 407 60.2
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.4e-117 427.2 422 60.4
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 5.2e-117 425.2 407 60.7
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.5e-116 423.7 410 61.0
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.5e-116 423.7 411 61.1
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.6e-116 422.9 418 59.8
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 5.8e-116 421.8 414 60.4
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 5.8e-116 421.8 404 60.6
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 7.5e-116 421.4 409 60.4
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 1.3e-115 420.6 419 60.4
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.3e-115 420.6 403 60.8
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.7e-115 420.2 405 59.8
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 6.4e-115 418.3 401 61.6
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 3.2e-114 416.0 418 60.3
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 9.2e-114 414.5 406 59.4
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.2e-113 414.1 408 59.8
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.2e-113 414.1 364 64.3
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.2e-113 414.1 411 59.9
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.7e-113 412.9 414 58.9
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 2.7e-113 412.9 413 59.3
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.7e-112 410.2 366 63.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.7e-112 410.2 415 58.8
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.3e-112 409.8 427 57.6
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 5.1e-112 408.7 408 59.8
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 6.6e-112 408.3 414 58.2
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.6e-112 408.3 427 58.1
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 6.6e-112 408.3 429 57.8
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 1.5e-111 407.1 430 57.4
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.9e-111 406.8 427 57.4
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 2.5e-111 406.4 405 60.0
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.6e-111 405.2 427 57.1
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 7.3e-111 404.8 412 57.8
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 1.6e-110 403.7 427 57.6
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 1.6e-110 403.7 422 57.6
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 3.6e-110 402.5 420 58.3
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.1e-109 401.0 411 58.2
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.4e-109 400.6 413 58.6
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.3e-109 399.8 407 57.5
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 5.2e-109 398.7 411 59.4
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.2e-108 397.5 411 57.2
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 9.9e-108 394.4 404 57.9
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 3.7e-107 392.5 409 57.7
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 6.4e-107 391.7 401 56.6
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 7.1e-106 388.3 408 55.9
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 9.2e-106 387.9 422 55.0
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.7e-104 383.6 426 55.2
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 2.3e-104 383.3 407 57.0
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 5.1e-104 382.1 426 53.8
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 8.6e-104 381.3 423 53.4
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.9e-103 380.2 335 62.7
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-103 379.8 423 54.1
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 3.3e-103 379.4 421 55.1
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.3e-103 379.0 421 55.6
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 5.6e-103 378.6 407 55.8
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 7.3e-103 378.3 409 54.8
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 9.5e-103 377.9 407 55.8
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.2e-102 377.5 425 53.9
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.2e-102 377.5 427 53.9
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.6e-102 377.1 431 54.8
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 2.1e-102 376.7 430 55.1
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.1e-102 376.7 430 55.1
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 2.1e-102 376.7 411 56.0
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.8e-102 376.3 430 54.9
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.8e-101 373.6 431 52.4
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.4e-101 373.2 408 55.6
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.4e-101 373.2 363 60.6
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 6.8e-101 371.7 429 54.3
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 8.9e-101 371.3 531 47.8
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.2e-100 370.9 422 55.2
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 4.4e-100 369.0 428 52.8
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 7.6e-100 368.2 429 53.1
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 7.6e-100 368.2 429 53.4
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 1.7e-99 367.1 416 55.0
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 1.3e-96 357.5 356 59.8
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 2.3e-96 356.7 403 53.3
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 5.1e-96 355.5 446 52.0
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.9e-95 353.6 401 53.9
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.3e-95 352.8 429 51.5
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 7.3e-95 351.7 421 50.8
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 7.3e-95 351.7 421 51.3
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 1.2e-94 350.9 421 50.6
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 4.9e-91 339.0 424 50.2
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 7.3e-87 325.1 409 51.8
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 2.4e-85 320.1 322 59.0
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 5.4e-82 308.9 345 54.2
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 7.1e-82 308.5 418 47.4
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.4e-77 294.3 329 53.5
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 1.2e-76 291.2 342 50.3
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 2.9e-75 286.6 314 55.7
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 5.1e-72 275.8 334 53.6
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 4.3e-71 272.7 270 57.8
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.4e-68 263.1 400 43.8
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 6.7e-64 248.8 267 53.9
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.9e-63 247.3 334 46.1
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 2.6e-60 236.9 413 40.4
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 9.7e-55 218.4 303 47.5
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 5.5e-50 202.6 211 56.4
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 2.0e-47 194.1 383 38.1
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 2.1e-41 174.1 263 44.9
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 4.4e-39 166.4 203 50.7
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.4e-37 161.4 150 62.0
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 3.0e-24 117.1 88 69.3
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.2e-17 95.1 490 25.3
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 2.1e-17 94.4 354 26.0
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-15 88.6 85 56.5
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 1.8e-13 81.3 147 44.9
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 2.3e-08 64.3 249 24.1
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-07 62.0 48 56.2
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.5e-07 61.6 53 54.7
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 4.4e-07 60.1 47 57.4
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 6.4e-06 56.2 172 29.7


User provided reference genes

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