Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.8e-85 317.4 171 100.0
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.7e-40 169.9 180 54.4
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 2.3e-40 169.5 180 58.9
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.1e-37 159.1 182 53.3
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 8.4e-35 151.0 137 59.9
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.4e-34 149.4 163 49.1
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 7.1e-34 147.9 133 60.9
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.2e-33 147.1 172 50.0
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 3.5e-33 145.6 166 48.8
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 6.6e-32 141.4 137 56.2
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.1e-31 140.6 162 50.0
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.3e-30 137.1 179 51.4
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 1.3e-30 137.1 132 54.5
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 2.8e-30 136.0 162 46.3
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.8e-30 136.0 115 59.1
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.8e-30 136.0 115 59.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 3.6e-30 135.6 115 62.6
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.4e-29 133.7 111 61.3
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 1.8e-29 133.3 130 53.8
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.4e-29 132.9 177 49.7
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 2.4e-29 132.9 114 58.8
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 4.0e-29 132.1 164 48.8
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 5.3e-29 131.7 114 64.0
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 6.9e-29 131.3 163 48.5
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 9.0e-29 131.0 110 59.1
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.5e-28 130.2 110 57.3
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.6e-28 129.4 140 50.7
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.6e-28 129.4 150 50.7
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.4e-28 129.0 106 60.4
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.4e-28 129.0 106 60.4
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 4.5e-28 128.6 129 52.7
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 9.9e-28 127.5 136 48.5
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 2.2e-27 126.3 166 45.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.9e-27 125.9 187 41.2
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.8e-27 125.6 152 47.4
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 4.9e-27 125.2 75 74.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 4.9e-27 125.2 69 82.6
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 6.4e-27 124.8 74 77.0
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 8.4e-27 124.4 102 60.8
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-26 124.0 135 59.3
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.4e-26 123.6 170 44.1
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.4e-26 123.6 74 75.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.9e-26 123.2 103 56.3
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.9e-26 123.2 71 78.9
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.9e-26 123.2 152 46.7
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.9e-26 123.2 115 57.4
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 2.4e-26 122.9 69 78.3
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.2e-26 122.5 69 78.3
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 5.4e-26 121.7 82 70.7
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.4e-26 121.7 82 70.7
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.4e-26 121.7 82 70.7
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 5.4e-26 121.7 69 78.3
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 7.1e-26 121.3 141 47.5
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.2e-25 120.6 69 79.7
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.2e-25 120.6 170 42.4
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.2e-25 120.6 170 42.4
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.2e-25 120.6 83 71.1
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.2e-25 120.6 69 76.8
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.6e-25 120.2 69 76.8
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.6e-25 120.2 171 42.1
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.6e-25 120.2 195 41.5
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 4.6e-25 118.6 110 57.3
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 6.0e-25 118.2 68 76.5
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 6.0e-25 118.2 100 56.0
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 7.9e-25 117.9 148 45.3
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 7.9e-25 117.9 135 48.1
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 7.9e-25 117.9 78 69.2
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 7.9e-25 117.9 143 45.5
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.0e-24 117.5 69 73.9
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.3e-24 117.1 141 45.4
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.3e-24 117.1 106 55.7
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.3e-24 117.1 169 43.8
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.8e-24 116.7 142 54.2
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.8e-24 116.7 75 72.0
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 2.3e-24 116.3 106 55.7
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 2.3e-24 116.3 106 55.7
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 2.3e-24 116.3 106 55.7
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 2.3e-24 116.3 141 49.6
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 3.0e-24 115.9 132 56.8
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.0e-24 115.9 70 77.1
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 3.0e-24 115.9 111 56.8
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 3.0e-24 115.9 72 73.6
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 5.1e-24 115.2 158 42.4
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 8.7e-24 114.4 133 47.4
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.1e-23 114.0 110 52.7
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 3.3e-23 112.5 78 70.5
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 3.3e-23 112.5 74 70.3
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 4.3e-23 112.1 70 74.3
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-21 107.5 70 72.9
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.1e-21 107.5 127 44.9
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 6.9e-21 104.8 113 43.4
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 8.4e-19 97.8 74 56.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 4.2e-18 95.5 71 62.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 9.3e-18 94.4 70 58.6
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 1.6e-17 93.6 167 37.7
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 4.6e-17 92.0 69 66.7
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 7.9e-17 91.3 116 42.2
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.8e-16 90.1 66 59.1
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 4.1e-13 79.0 54 59.3


User provided reference genes

Program Settings