Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 3.6e-100 368.2 185 100.0
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 1.5e-77 293.1 185 81.6
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 6.0e-71 271.2 187 77.5
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 1.8e-70 269.6 187 77.0
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 1.5e-69 266.5 168 78.6
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 4.5e-50 201.8 182 60.4
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 1.7e-49 199.9 189 59.3
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 8.5e-49 197.6 194 56.7
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 1.4e-48 196.8 182 58.8
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 2.5e-48 196.1 185 57.8
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 7.2e-48 194.5 181 56.9
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 1.2e-47 193.7 188 58.0
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 2.7e-47 192.6 176 58.5
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 3.6e-47 192.2 192 56.8
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 4.6e-47 191.8 185 58.9
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 1.0e-46 190.7 141 66.7
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.3e-46 190.3 181 56.9
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 1.8e-46 189.9 186 57.0
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 2.3e-46 189.5 193 54.4
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 2.3e-46 189.5 187 56.1
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 2.3e-46 189.5 190 54.2
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 3.0e-46 189.1 185 56.8
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 3.9e-46 188.7 188 56.4
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 3.9e-46 188.7 181 57.5
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 6.7e-46 188.0 117 75.2
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 6.7e-46 188.0 161 61.5
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 1.5e-45 186.8 144 65.3
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 3.3e-45 185.7 187 57.2
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 3.3e-45 185.7 194 56.2
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 4.3e-45 185.3 193 53.4
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 5.7e-45 184.9 158 57.6
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 5.7e-45 184.9 133 68.4
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 7.4e-45 184.5 185 56.8
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 9.7e-45 184.1 139 69.1
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 2.2e-44 183.0 142 64.8
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 1.1e-43 180.6 113 76.1
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 1.1e-43 180.6 145 65.5
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 1.1e-43 180.6 114 74.6
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 3.1e-43 179.1 188 51.1
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 3.1e-43 179.1 144 63.2
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 5.3e-43 178.3 124 68.5
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 6.9e-43 177.9 180 53.9
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 9.1e-43 177.6 193 51.3
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 9.1e-43 177.6 128 68.0
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 9.1e-43 177.6 128 68.0
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 9.1e-43 177.6 128 68.0
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 1.2e-42 177.2 192 54.7
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 1.5e-42 176.8 100 81.0
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 2.0e-42 176.4 187 54.5
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.0e-41 174.1 185 54.6
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 1.3e-41 173.7 192 52.1
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 1.3e-41 173.7 132 64.4
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 1.3e-41 173.7 171 54.4
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 1.3e-41 173.7 106 75.5
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 1.7e-41 173.3 184 54.3
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 2.2e-41 172.9 183 53.6
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 5.0e-41 171.8 94 84.0
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 5.0e-41 171.8 143 61.5
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 6.5e-41 171.4 128 64.1
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 8.5e-41 171.0 124 68.5
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 1.4e-40 170.2 100 77.0
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 1.9e-40 169.9 126 66.7
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 1.2e-39 167.2 186 51.1
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 1.6e-39 166.8 193 48.7
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 2.7e-39 166.0 104 74.0
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 4.6e-39 165.2 145 56.6
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 7.9e-39 164.5 191 51.3
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 2.3e-38 162.9 143 58.7
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 2.3e-38 162.9 182 48.4
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 3.9e-38 162.2 135 60.7
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 5.1e-38 161.8 96 77.1
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 6.7e-38 161.4 113 68.1
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 8.8e-38 161.0 96 77.1
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 1.1e-37 160.6 135 58.5
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 1.5e-37 160.2 100 75.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 1.5e-37 160.2 103 71.8
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 2.0e-37 159.8 135 62.2
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 3.3e-37 159.1 113 68.1
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 4.4e-37 158.7 187 50.3
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 5.7e-37 158.3 185 48.1
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.7e-37 158.3 169 50.3
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 5.7e-37 158.3 189 46.6
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 7.4e-37 157.9 173 52.0
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 1.3e-36 157.1 124 62.1
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 1.3e-36 157.1 111 68.5
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 1.3e-36 157.1 111 68.5
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 1.3e-36 157.1 111 68.5
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 2.8e-36 156.0 100 74.0
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 3.7e-36 155.6 100 74.0
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 3.7e-36 155.6 126 61.9
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 4.8e-36 155.2 97 71.1
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 4.8e-36 155.2 126 61.9
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 8.2e-36 154.5 100 73.0
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 8.2e-36 154.5 100 73.0
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 8.2e-36 154.5 100 73.0
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 1.4e-35 153.7 100 72.0
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 1.4e-35 153.7 190 47.4
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 1.8e-35 153.3 94 74.5
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 4.1e-35 152.1 84 83.3
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 6.9e-35 151.4 91 76.9
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 9.1e-35 151.0 100 69.0
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 1.5e-34 150.2 124 61.3
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 2.0e-34 149.8 181 47.0
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 2.6e-34 149.4 186 46.8
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 3.4e-34 149.1 99 69.7
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.4e-34 149.1 99 69.7
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.4e-34 149.1 99 69.7
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 4.5e-34 148.7 187 47.1
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 7.7e-34 147.9 189 49.2
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.0e-33 147.5 99 68.7
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.0e-33 145.2 99 68.7
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.4e-32 143.7 99 67.7
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 1.5e-29 133.7 126 53.2
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 2.6e-29 132.9 113 60.2
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 3.7e-28 129.0 113 52.2
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 3.1e-27 125.9 95 57.9
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 3.5e-26 122.5 89 60.7
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 3.8e-25 119.0 78 69.2
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.5e-24 117.1 134 50.0
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.7e-23 112.8 96 58.3
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 4.0e-22 109.0 88 55.7
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 4.8e-20 102.1 72 62.5
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 1.1e-19 100.9 104 48.1
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 5.3e-19 98.6 88 58.0
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.5e-18 95.5 134 45.5
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 5.9e-18 95.1 94 48.9
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 7.7e-18 94.7 75 57.3
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.6e-15 87.0 115 44.3
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.6e-15 85.9 80 56.2
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 1.0e-14 84.3 151 43.7
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 4.4e-13 79.0 68 52.9
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 3.5e-10 69.3 79 41.8
Cfa025074 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.3e-09 67.4 71 39.4
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 2.9e-09 66.2 42 71.4
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 8.6e-09 64.7 78 47.4
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 1.9e-08 63.5 71 43.7
Migut.E00281 Erythranthe guttata HOM05D002826 ORTHO05D003105 4.7e-07 58.9 81 39.5
unitig_27.g25229 Utricularia gibba HOM05D002826 ORTHO05D003105 6.8e-06 55.1 50 44.0
SGA_v2.0_scaffold59G20634 Striga asiatica HOM05D002826 ORTHO05D003105 8.8e-06 54.7 54 40.7


User provided reference genes

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