Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 5.0e-35 150.6 78 100.0
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 6.3e-30 133.7 75 88.0
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.4e-29 132.5 75 89.3
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 1.4e-29 132.5 75 89.3
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 2.3e-24 115.2 77 71.4
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 2.6e-23 111.7 77 67.5
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 4.4e-23 110.9 77 70.1
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 4.4e-23 110.9 77 70.1
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 9.8e-23 109.8 77 66.2
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 9.8e-23 109.8 77 67.5
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 3.7e-22 107.8 77 67.5
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 6.3e-22 107.1 75 65.3
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 6.3e-22 107.1 77 66.2
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 6.3e-22 107.1 70 71.4
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 1.1e-21 106.3 75 66.7
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 1.1e-21 106.3 73 68.5
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.8e-21 105.5 77 68.8
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.8e-21 105.5 77 68.8
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 1.8e-21 105.5 77 68.8
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.8e-21 105.5 77 66.2
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 1.8e-21 105.5 77 63.6
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 3.1e-21 104.8 77 66.2
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 4.1e-21 104.4 72 68.1
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 7.0e-21 103.6 77 63.6
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 7.0e-21 103.6 77 64.9
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 7.0e-21 103.6 81 64.2
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 7.0e-21 103.6 77 63.6
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 7.0e-21 103.6 77 63.6
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 9.1e-21 103.2 71 70.4
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 2.7e-20 101.7 77 67.5
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 4.5e-20 100.9 77 61.0
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 4.5e-20 100.9 70 67.1
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 5.9e-20 100.5 77 64.9
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 5.9e-20 100.5 77 61.0
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 7.7e-20 100.1 70 67.1
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 7.7e-20 100.1 77 62.3
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 1.0e-19 99.8 75 62.7
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 1.7e-19 99.0 75 64.0
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 2.9e-19 98.2 73 64.4
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 3.8e-19 97.8 77 61.0
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 5.0e-19 97.4 77 59.7
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 6.6e-19 97.1 75 61.3
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 8.6e-19 96.7 70 67.1
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 1.1e-18 96.3 75 60.0
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.5e-18 95.9 68 66.2
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 1.5e-18 95.9 75 61.3
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.9e-18 95.5 70 64.3
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.9e-18 95.5 75 57.3
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 1.9e-18 95.5 70 62.9
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 1.9e-18 95.5 77 61.0
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 2.5e-18 95.1 68 69.1
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 5.5e-18 94.0 65 66.2
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 9.5e-18 93.2 73 57.5
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 9.5e-18 93.2 77 57.1
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 9.5e-18 93.2 65 66.2
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 1.2e-17 92.8 75 57.3
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 1.2e-17 92.8 73 56.2
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 1.2e-17 92.8 73 56.2
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 1.2e-17 92.8 73 57.5
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 1.2e-17 92.8 77 57.1
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.8e-17 91.7 77 59.7
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 3.6e-17 91.3 73 57.5
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 3.6e-17 91.3 68 60.3
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 3.6e-17 91.3 68 60.3
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 4.7e-17 90.9 73 54.8
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 4.7e-17 90.9 65 66.2
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 6.1e-17 90.5 106 46.2
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 1.4e-16 89.4 69 59.4
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 1.8e-16 89.0 66 65.2
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 1.8e-16 89.0 77 58.4
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 1.8e-16 89.0 74 58.1
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 2.3e-16 88.6 72 58.3
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 3.0e-16 88.2 73 53.4
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 3.0e-16 88.2 60 71.7
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 8.9e-16 86.7 55 76.4
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 1.2e-15 86.3 66 60.6
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 2.0e-15 85.5 67 58.2
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 2.0e-15 85.5 66 59.1
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 2.0e-15 85.5 66 59.1
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 3.4e-15 84.7 66 62.1
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 9.8e-15 83.2 56 67.9
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 1.3e-14 82.8 76 53.9
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 3.7e-14 81.3 59 71.2
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 6.3e-14 80.5 58 67.2
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 8.3e-14 80.1 55 67.3
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 1.1e-13 79.7 57 64.9
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 1.4e-13 79.3 55 67.3
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 4.1e-13 77.8 58 60.3
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 7.0e-13 77.0 55 69.1
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 9.2e-13 76.6 79 51.9
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 2.7e-12 75.1 50 68.0
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 1.3e-11 72.8 58 56.9
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 3.9e-11 71.2 59 61.0
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 3.9e-11 71.2 49 69.4
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 2.5e-10 68.6 51 56.9
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.0e-09 63.5 52 57.7
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 8.0e-09 63.5 56 51.8
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 8.0e-09 63.5 50 56.0
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.2e-07 59.7 53 54.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 2.2e-06 55.5 47 48.9


User provided reference genes

Program Settings